Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80094 | Canola | nucleus | 98.4 | 97.47 |
| Bra004466.1-P | Field mustard | nucleus | 98.08 | 96.24 |
| CDY51420 | Canola | nucleus | 82.75 | 79.94 |
| CDY27500 | Canola | nucleus | 82.11 | 77.18 |
| AT2G47260.1 | Thale cress | nucleus | 81.47 | 75.67 |
| CDY72079 | Canola | nucleus | 18.21 | 51.35 |
| VIT_07s0005g01710.t01 | Wine grape | nucleus | 43.13 | 44.7 |
| CDX77096 | Canola | nucleus | 20.45 | 44.44 |
| KRH31775 | Soybean | nucleus | 45.37 | 43.96 |
| KRH69197 | Soybean | nucleus | 44.73 | 43.75 |
| CDX78504 | Canola | nucleus | 18.85 | 40.14 |
| CDX70492 | Canola | nucleus | 18.85 | 40.14 |
| CDX69672 | Canola | nucleus | 18.21 | 38.78 |
| CDX97223 | Canola | nucleus | 18.21 | 38.78 |
| PGSC0003DMT400023368 | Potato | nucleus | 36.42 | 35.96 |
| CDX87064 | Canola | nucleus | 19.49 | 35.67 |
| CDY48151 | Canola | nucleus | 19.49 | 35.67 |
| Solyc01g079260.2.1 | Tomato | nucleus | 36.1 | 35.31 |
| CDY11416 | Canola | nucleus | 33.55 | 35.23 |
| CDX76630 | Canola | nucleus | 33.23 | 35.02 |
| CDX83415 | Canola | nucleus, plastid | 20.13 | 33.51 |
| CDX76541 | Canola | nucleus | 31.31 | 33.33 |
| CDY43194 | Canola | nucleus | 29.39 | 33.21 |
| CDX95615 | Canola | nucleus, plastid | 20.13 | 33.16 |
| CDY24990 | Canola | nucleus | 17.89 | 33.14 |
| CDY08894 | Canola | nucleus | 30.99 | 32.99 |
| CDX88219 | Canola | nucleus | 18.53 | 32.95 |
| CDX98155 | Canola | nucleus | 29.71 | 32.75 |
| CDX95947 | Canola | nucleus | 30.35 | 32.31 |
| CDY26310 | Canola | nucleus | 28.11 | 32.23 |
| CDY05537 | Canola | nucleus | 17.25 | 32.14 |
| CDY40910 | Canola | nucleus | 30.03 | 31.97 |
| CDY44466 | Canola | nucleus | 17.89 | 31.82 |
| CDY39732 | Canola | nucleus | 17.89 | 31.82 |
| CDY52627 | Canola | nucleus | 17.89 | 31.82 |
| CDY01523 | Canola | nucleus | 31.63 | 31.73 |
| CDY09083 | Canola | nucleus | 31.63 | 31.63 |
| CDX90417 | Canola | nucleus | 31.63 | 31.63 |
| CDX99859 | Canola | nucleus | 27.48 | 31.5 |
| CDX78832 | Canola | nucleus | 30.99 | 31.49 |
| CDX99495 | Canola | nucleus | 31.31 | 31.41 |
| CDY04276 | Canola | nucleus | 28.75 | 31.36 |
| CDY07352 | Canola | nucleus | 28.75 | 31.14 |
| CDY38208 | Canola | nucleus | 18.21 | 30.65 |
| CDY34393 | Canola | nucleus | 18.53 | 30.53 |
| CDY25554 | Canola | nucleus | 18.21 | 30.32 |
| CDY55479 | Canola | nucleus | 17.89 | 30.11 |
| CDY71963 | Canola | nucleus | 20.45 | 29.91 |
| CDY54139 | Canola | nucleus | 28.43 | 29.87 |
| CDY48258 | Canola | nucleus | 20.45 | 29.77 |
| CDY30483 | Canola | nucleus | 20.77 | 29.55 |
| CDY23453 | Canola | nucleus | 20.45 | 29.36 |
| CDY03224 | Canola | nucleus | 30.03 | 29.28 |
| CDY35159 | Canola | nucleus | 30.03 | 29.28 |
| CDY72613 | Canola | nucleus | 30.03 | 29.1 |
| CDY43969 | Canola | nucleus | 29.39 | 29.02 |
| CDY33471 | Canola | nucleus | 29.71 | 28.79 |
| CDX77655 | Canola | nucleus | 29.39 | 28.48 |
| CDY50313 | Canola | nucleus | 27.48 | 27.83 |
| CDY05620 | Canola | nucleus | 33.55 | 26.85 |
| CDX87722 | Canola | nucleus | 26.52 | 26.52 |
| CDX85413 | Canola | nucleus | 33.23 | 26.07 |
| CDY18694 | Canola | nucleus | 14.38 | 26.01 |
| CDY14512 | Canola | nucleus | 16.29 | 24.76 |
| CDY08849 | Canola | nucleus | 16.29 | 24.76 |
| CDX81259 | Canola | nucleus | 15.65 | 24.62 |
| CDY12144 | Canola | nucleus | 23.0 | 24.41 |
| CDY53184 | Canola | nucleus | 22.04 | 23.55 |
| CDY41978 | Canola | nucleus | 22.36 | 23.49 |
| CDY31301 | Canola | nucleus | 14.38 | 22.84 |
| CDX72701 | Canola | nucleus | 20.45 | 22.7 |
| CDY46824 | Canola | nucleus | 14.7 | 15.86 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078HKF9 | UniProt:A0A078HKF9 | EnsemblPlants:CDY37794 | ProteinID:CDY37794 |
| ProteinID:CDY37794.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00064730001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PIRSF:PIRSF038130 |
| PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF80 | SMART:SM00774 | SUPFAM:SSF118290 | InterPro:TF_WRKY_IIc |
| UniParc:UPI0004EF00B9 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : |
Description
BnaC04g00310DBnaC04g00310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HKF9]
Coordinates
chrLK032408:-:296521..298171
Molecular Weight (calculated)
35411.2 Da
IEP (calculated)
6.857
GRAVY (calculated)
-0.858
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFTSFHQPS LQSIWDFGEE ERDSLGFMEL LGSQHHSFLL ETLQPQTQPF EKLSSSDLTI LQAPPSNATA DKYVTSKVES LCSDINPPAT PNSSSISSAS
101: SEAVDEDKAK REENEEHEQK KSDTNKQLKP KKNSQKRQRE ARIAFMTKSE VDHLEDGYRW RKYGQKAVKN SPFPRSYYRC TTASCNVKKR VERSFRDPST
201: VVTTYEGQHT HISPLTSRPI SSGGFFFGSS GVASNLGNFG FPMESSTLIY PQFQQLVHYN QQQQQQELLP CFGGVGEYVT RHGDDERVKK SRGLVKDNGL
301: LQDVVPSHML KEE
101: SEAVDEDKAK REENEEHEQK KSDTNKQLKP KKNSQKRQRE ARIAFMTKSE VDHLEDGYRW RKYGQKAVKN SPFPRSYYRC TTASCNVKKR VERSFRDPST
201: VVTTYEGQHT HISPLTSRPI SSGGFFFGSS GVASNLGNFG FPMESSTLIY PQFQQLVHYN QQQQQQELLP CFGGVGEYVT RHGDDERVKK SRGLVKDNGL
301: LQDVVPSHML KEE
001: MEFTDFSKTS FYYPSSQSVW DFGDLAAAER HSLGFMELLS SQQHQDFATV SPHSFLLQTS QPQTQTQPSA KLSSSIIQAP PSEQLVTSKV ESLCSDHLLI
101: NPPATPNSSS ISSASSEALN EEKPKTEDNE EEGGEDQQEK SHTKKQLKAK KNNQKRQREA RVAFMTKSEV DHLEDGYRWR KYGQKAVKNS PFPRSYYRCT
201: TASCNVKKRV ERSFRDPSTV VTTYEGQHTH ISPLTSRPIS TGGFFGSSGA ASSLGNGCFG FPIDGSTLIS PQFQQLVQYH HQQQQQELMS CFGGVNEYLN
301: SHANEYGDDN RVKKSRVLVK DNGLLQDVVP SHMLKEE
101: NPPATPNSSS ISSASSEALN EEKPKTEDNE EEGGEDQQEK SHTKKQLKAK KNNQKRQREA RVAFMTKSEV DHLEDGYRWR KYGQKAVKNS PFPRSYYRCT
201: TASCNVKKRV ERSFRDPSTV VTTYEGQHTH ISPLTSRPIS TGGFFGSSGA ASSLGNGCFG FPIDGSTLIS PQFQQLVQYH HQQQQQELMS CFGGVNEYLN
301: SHANEYGDDN RVKKSRVLVK DNGLLQDVVP SHMLKEE
Arabidopsis Description
WRKY23Probable WRKY transcription factor 23 [Source:UniProtKB/Swiss-Prot;Acc:O22900]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.