Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76541 | Canola | nucleus | 96.26 | 96.26 |
| Bra040926.1-P | Field mustard | nucleus | 95.92 | 95.92 |
| CDY01523 | Canola | nucleus | 87.07 | 82.05 |
| CDX90417 | Canola | nucleus | 86.39 | 81.15 |
| CDY09083 | Canola | nucleus | 86.05 | 80.83 |
| CDX78832 | Canola | nucleus | 82.31 | 78.57 |
| CDX99495 | Canola | nucleus | 82.31 | 77.56 |
| AT4G18170.1 | Thale cress | nucleus | 83.33 | 77.04 |
| CDY03224 | Canola | nucleus | 61.22 | 56.07 |
| CDY35159 | Canola | nucleus | 60.88 | 55.76 |
| CDY72079 | Canola | nucleus | 20.75 | 54.95 |
| CDX77655 | Canola | nucleus | 59.52 | 54.18 |
| CDY33471 | Canola | nucleus | 59.18 | 53.87 |
| CDY43969 | Canola | nucleus | 57.14 | 53.0 |
| CDX77096 | Canola | nucleus | 21.43 | 43.75 |
| CDX99859 | Canola | nucleus | 39.46 | 42.49 |
| VIT_10s0003g02810.t01 | Wine grape | nucleus | 45.92 | 42.32 |
| CDY26310 | Canola | nucleus | 39.12 | 42.12 |
| CDX87722 | Canola | nucleus | 44.22 | 41.53 |
| CDY43194 | Canola | nucleus | 38.78 | 41.16 |
| CDX98155 | Canola | nucleus | 39.12 | 40.49 |
| KRH58435 | Soybean | nucleus | 47.96 | 39.39 |
| CDX70492 | Canola | nucleus | 19.05 | 38.1 |
| CDX78504 | Canola | nucleus | 19.05 | 38.1 |
| KRH42308 | Soybean | nucleus | 47.62 | 37.74 |
| CDX69672 | Canola | nucleus | 18.71 | 37.41 |
| CDX97223 | Canola | nucleus | 18.71 | 37.41 |
| CDX83415 | Canola | nucleus, plastid | 22.79 | 35.64 |
| CDX95615 | Canola | nucleus, plastid | 22.79 | 35.26 |
| OQU78504 | Sorghum | nucleus | 30.95 | 34.73 |
| GSMUA_Achr6P27090_001 | Banana | nucleus | 35.37 | 34.67 |
| CDY24990 | Canola | nucleus | 19.05 | 33.14 |
| CDY44466 | Canola | nucleus | 19.73 | 32.95 |
| CDY48151 | Canola | nucleus | 19.05 | 32.75 |
| CDX87064 | Canola | nucleus | 19.05 | 32.75 |
| CDY05537 | Canola | nucleus | 18.71 | 32.74 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.97 | 32.64 |
| CDY39732 | Canola | nucleus | 19.39 | 32.39 |
| GSMUA_Achr9P06750_001 | Banana | nucleus | 32.31 | 32.2 |
| CDY30483 | Canola | nucleus | 23.47 | 31.36 |
| CDY71963 | Canola | nucleus | 22.79 | 31.31 |
| CDY52627 | Canola | nucleus | 18.71 | 31.25 |
| CDX88219 | Canola | nucleus | 18.71 | 31.25 |
| CDY23453 | Canola | nucleus | 23.13 | 31.19 |
| CDY48258 | Canola | nucleus | 22.79 | 31.16 |
| CDY37794 | Canola | nucleus | 32.99 | 30.99 |
| CDX80094 | Canola | nucleus | 32.99 | 30.7 |
| CDY38208 | Canola | nucleus | 19.05 | 30.11 |
| CDY34393 | Canola | nucleus | 19.05 | 29.47 |
| CDY25554 | Canola | nucleus | 18.71 | 29.26 |
| CDY54139 | Canola | nucleus | 29.59 | 29.19 |
| CDY55479 | Canola | nucleus | 18.37 | 29.03 |
| TraesCS1A01G421800.1 | Wheat | nucleus | 28.23 | 29.02 |
| CDY51420 | Canola | nucleus | 31.97 | 29.01 |
| CDX95947 | Canola | nucleus | 28.91 | 28.91 |
| CDY40910 | Canola | nucleus | 28.91 | 28.91 |
| TraesCS1D01G430000.1 | Wheat | nucleus | 28.91 | 28.72 |
| CDY04276 | Canola | nucleus | 27.55 | 28.22 |
| TraesCS1B01G453200.1 | Wheat | nucleus | 27.55 | 28.22 |
| TraesCS1D01G429800.1 | Wheat | nucleus | 27.55 | 28.12 |
| CDY07352 | Canola | nucleus | 27.55 | 28.03 |
| CDY27500 | Canola | nucleus | 31.63 | 27.93 |
| Os05t0583000-01 | Rice | nucleus | 31.97 | 27.89 |
| CDY50313 | Canola | nucleus | 28.91 | 27.51 |
| HORVU1Hr1G092130.1 | Barley | nucleus | 28.57 | 27.18 |
| CDY11416 | Canola | nucleus | 27.55 | 27.18 |
| CDY18694 | Canola | nucleus | 15.99 | 27.17 |
| TraesCS1D01G429900.1 | Wheat | nucleus | 28.23 | 27.04 |
| TraesCS1A01G421900.1 | Wheat | nucleus | 19.05 | 26.92 |
| CDY72613 | Canola | nucleus | 29.25 | 26.63 |
| TraesCS1B01G453300.1 | Wheat | nucleus | 28.23 | 26.6 |
| CDX76630 | Canola | nucleus | 26.87 | 26.6 |
| CDY53184 | Canola | nucleus | 24.83 | 24.91 |
| CDY05620 | Canola | nucleus | 32.99 | 24.81 |
| CDX81259 | Canola | nucleus | 16.67 | 24.62 |
| CDY41978 | Canola | nucleus | 24.83 | 24.5 |
| CDX72701 | Canola | nucleus | 23.47 | 24.47 |
| CDY08849 | Canola | nucleus | 16.67 | 23.79 |
| CDY14512 | Canola | nucleus | 16.67 | 23.79 |
| CDY12144 | Canola | nucleus | 23.81 | 23.73 |
| CDX85413 | Canola | nucleus | 31.29 | 23.06 |
| CDY31301 | Canola | nucleus | 14.63 | 21.83 |
| CDY46824 | Canola | nucleus | 14.29 | 14.48 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078F786 | UniProt:A0A078F786 | EnsemblPlants:CDY08894 | ProteinID:CDY08894 |
| ProteinID:CDY08894.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00000899001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PIRSF:PIRSF038130 | PFscan:PS50811 |
| PANTHER:PTHR31221 | PANTHER:PTHR31221:SF56 | SMART:SM00774 | SUPFAM:SSF118290 | InterPro:TF_WRKY_IIc | UniParc:UPI0004EDB33C |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
BnaC08g11240DBnaC08g11240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F786]
Coordinates
chrLK031990:+:318247..319405
Molecular Weight (calculated)
33184.1 Da
IEP (calculated)
7.596
GRAVY (calculated)
-1.043
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNETKDLYN YQYPSSFSLY EMMNLPSSAQ SSYGNNGFDH GLHSSPGAYD SLLQKTFGLS PPSSEVFNSS INQESNLCAT NDVTGETPTR VSASSSSSEA
101: DHPGEDCGKS QRKRELVEDG REENRSSKTV DKTKKKEEKK EREPRVSFMT KSEVDHLEDG YRWRKYGQKA VKNSPYPRSY YRCTTQKCNV KKQVERSLQD
201: PTVVITTYEG QHNHPIPTNL RGSSAAAAMY SANFMNPRSL KHDIFRTAAL DYGYGQSGYG SVNANPSSHQ EYRQGSEYEL LKEIFPSIFF KQEP
101: DHPGEDCGKS QRKRELVEDG REENRSSKTV DKTKKKEEKK EREPRVSFMT KSEVDHLEDG YRWRKYGQKA VKNSPYPRSY YRCTTQKCNV KKQVERSLQD
201: PTVVITTYEG QHNHPIPTNL RGSSAAAAMY SANFMNPRSL KHDIFRTAAL DYGYGQSGYG SVNANPSSHQ EYRQGSEYEL LKEIFPSIFF KQEP
001: MDDHVEHNYN TSLEEVHFKS LSDCLQSSLV MDYNSLEKVF KFSPYSSPFQ SVSPSVNNPY LNLTSNSPVV SSSSNEGEPK ENTNDKSDQM EDNEGDLHGV
101: GESSKQLTKQ GKKKGEKKER EVRVAFMTKS EIDHLEDGYR WRKYGQKAVK NSPYPRSYYR CTTQKCNVKK RVERSFQDPS IVITTYEGKH NHPIPSTLRG
201: TVAAEHLLVH RGGGGSLLHS FPRHHQDFLM MKHSPANYQS VGSLSYEHGH GTSSYNFNNN QPVVDYGLLQ DIVPSMFSKN ES
101: GESSKQLTKQ GKKKGEKKER EVRVAFMTKS EIDHLEDGYR WRKYGQKAVK NSPYPRSYYR CTTQKCNVKK RVERSFQDPS IVITTYEGKH NHPIPSTLRG
201: TVAAEHLLVH RGGGGSLLHS FPRHHQDFLM MKHSPANYQS VGSLSYEHGH GTSSYNFNNN QPVVDYGLLQ DIVPSMFSKN ES
Arabidopsis Description
WRKY71Probable WRKY transcription factor 71 [Source:UniProtKB/Swiss-Prot;Acc:Q93WV4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.