Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036138.1-P | Field mustard | nucleus | 99.69 | 91.22 |
| CDX85413 | Canola | nucleus | 85.14 | 68.92 |
| CDY05620 | Canola | nucleus | 80.81 | 66.75 |
| AT5G49520.1 | Thale cress | nucleus | 82.04 | 66.42 |
| CDY72079 | Canola | nucleus | 18.58 | 54.05 |
| CDX77096 | Canola | nucleus | 19.2 | 43.06 |
| VIT_05s0077g00730.t01 | Wine grape | nucleus | 38.39 | 40.13 |
| CDX69672 | Canola | nucleus | 17.96 | 39.46 |
| CDX78504 | Canola | nucleus | 17.96 | 39.46 |
| CDX97223 | Canola | nucleus | 17.96 | 39.46 |
| CDX70492 | Canola | nucleus | 17.65 | 38.78 |
| KRH36956 | Soybean | nucleus | 35.29 | 34.44 |
| CDY05537 | Canola | nucleus | 17.65 | 33.93 |
| CDY44466 | Canola | nucleus | 18.27 | 33.52 |
| CDX83415 | Canola | nucleus, plastid | 19.2 | 32.98 |
| CDY39732 | Canola | nucleus | 17.96 | 32.95 |
| CDX95615 | Canola | nucleus, plastid | 19.2 | 32.63 |
| CDY54139 | Canola | nucleus | 30.03 | 32.55 |
| CDY24990 | Canola | nucleus | 17.03 | 32.54 |
| CDY04276 | Canola | nucleus | 28.79 | 32.4 |
| KRH11917 | Soybean | nucleus | 35.6 | 32.3 |
| CDY07352 | Canola | nucleus | 28.48 | 31.83 |
| CDX95947 | Canola | nucleus | 28.48 | 31.29 |
| CDY40910 | Canola | nucleus | 28.48 | 31.29 |
| CDX88219 | Canola | nucleus | 17.03 | 31.25 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.1 | 31.23 |
| CDY48151 | Canola | nucleus | 16.41 | 30.99 |
| CDX87064 | Canola | nucleus | 16.41 | 30.99 |
| CDY52627 | Canola | nucleus | 16.72 | 30.68 |
| CDY34393 | Canola | nucleus | 17.96 | 30.53 |
| CDY25554 | Canola | nucleus | 17.65 | 30.32 |
| CDY38208 | Canola | nucleus | 17.34 | 30.11 |
| CDX80094 | Canola | nucleus | 29.41 | 30.06 |
| CDY18694 | Canola | nucleus | 16.1 | 30.06 |
| CDY26310 | Canola | nucleus | 25.39 | 30.04 |
| CDY37794 | Canola | nucleus | 29.1 | 30.03 |
| GSMUA_Achr8P10740_001 | Banana | nucleus | 29.1 | 30.03 |
| CDY50313 | Canola | nucleus | 28.48 | 29.77 |
| CDY43194 | Canola | nucleus | 25.39 | 29.6 |
| CDX76541 | Canola | nucleus | 26.93 | 29.59 |
| CDY55479 | Canola | nucleus | 17.03 | 29.57 |
| CDY09083 | Canola | nucleus | 28.48 | 29.39 |
| CDX90417 | Canola | nucleus | 28.48 | 29.39 |
| CDX99859 | Canola | nucleus | 24.77 | 29.3 |
| CDY08894 | Canola | nucleus | 26.63 | 29.25 |
| CDY71963 | Canola | nucleus | 19.2 | 28.97 |
| CDY48258 | Canola | nucleus | 19.2 | 28.84 |
| CDY01523 | Canola | nucleus | 27.55 | 28.53 |
| CDX78832 | Canola | nucleus | 26.93 | 28.25 |
| CDY30483 | Canola | nucleus | 19.2 | 28.18 |
| CDX98155 | Canola | nucleus | 24.77 | 28.17 |
| CDX99495 | Canola | nucleus | 26.93 | 27.88 |
| CDY51420 | Canola | nucleus | 27.86 | 27.78 |
| CDY43969 | Canola | nucleus | 27.24 | 27.76 |
| CDY27500 | Canola | nucleus | 28.48 | 27.63 |
| CDY23453 | Canola | nucleus | 18.58 | 27.52 |
| CDX81259 | Canola | nucleus | 16.72 | 27.14 |
| CDX77655 | Canola | nucleus | 26.32 | 26.32 |
| CDY33471 | Canola | nucleus | 26.32 | 26.32 |
| CDX76630 | Canola | nucleus | 24.15 | 26.26 |
| CDY14512 | Canola | nucleus | 16.72 | 26.21 |
| CDY08849 | Canola | nucleus | 16.72 | 26.21 |
| CDY11416 | Canola | nucleus | 24.15 | 26.17 |
| CDY03224 | Canola | nucleus | 26.01 | 26.17 |
| CDY31301 | Canola | nucleus | 15.79 | 25.89 |
| CDY35159 | Canola | nucleus | 25.7 | 25.86 |
| CDY12144 | Canola | nucleus | 21.98 | 24.07 |
| CDY41978 | Canola | nucleus | 21.67 | 23.49 |
| CDX72701 | Canola | nucleus | 20.43 | 23.4 |
| CDY53184 | Canola | nucleus | 20.74 | 22.87 |
| CDX87722 | Canola | nucleus | 21.98 | 22.68 |
| CDY46824 | Canola | nucleus | 15.79 | 17.59 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078JY56 | UniProt:A0A078JY56 | EnsemblPlants:CDY72613 | ProteinID:CDY72613 |
| ProteinID:CDY72613.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00033941001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF80 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EDB107 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaAnng41650DBnaAnng41650D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JY56]
Coordinates
chrLK052251:-:1..1678
Molecular Weight (calculated)
35902.1 Da
IEP (calculated)
6.799
GRAVY (calculated)
-0.749
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MVNLDTSSDH HNHQLELANN INLSSIFDAP VSSPFPYSYL AEEPNHFLDL LSQDHHQFAS SSNSSSFSFD AFPLQNNNTN LFYTDLPLSQ PSTTKATSSE
101: VVNTATTSPN STSVSSSSKE AVNDNTDKEV TLKDPEEGDQ QEQKDTKPQL KAKKKNQKKA REARFAFLTR SDIDNLDDGY RWRKYGQKAV KNSPYPRSYY
201: RCTTVGCGVK KRVERSSDDP YIVMTTYEGQ HTHPFPMTRG HIAMLTSPIL NHGATTASSS SFSIPQPRYL LTQHHQPYSS MYNNSLSMIN QSSSDGIFAN
301: PGSSSFPVFS YDVSLASTST TSV
101: VVNTATTSPN STSVSSSSKE AVNDNTDKEV TLKDPEEGDQ QEQKDTKPQL KAKKKNQKKA REARFAFLTR SDIDNLDDGY RWRKYGQKAV KNSPYPRSYY
201: RCTTVGCGVK KRVERSSDDP YIVMTTYEGQ HTHPFPMTRG HIAMLTSPIL NHGATTASSS SFSIPQPRYL LTQHHQPYSS MYNNSLSMIN QSSSDGIFAN
301: PGSSSFPVFS YDVSLASTST TSV
001: MEKKKEEDHH HQQQQQQQKE IKNTETKIEQ EQEQEQKQEI SQASSSSNMA NLVTSSDHHP LELAGNLSSI FDTSSLPFPY SYFEDHSSNN PNSFLDLLRQ
101: DHQFASSSNS SSFSFDAFPL PNNNNNTSFF TDLPLPQAES SEVVNTTPTS PNSTSVSSSS NEAANDNNSG KEVTVKDQEE GDQQQEQKGT KPQLKAKKKN
201: QKKAREARFA FLTKSDIDNL DDGYRWRKYG QKAVKNSPYP RSYYRCTTVG CGVKKRVERS SDDPSIVMTT YEGQHTHPFP MTPRGHIGML TSPILDHGAT
301: TASSSSFSIP QPRYLLTQHH QPYNMYNNNS LSMINRRSSD GTFVNPGPSS SFPGFGYDMS QASTSTSSSI RDHGLLQDIL PSQIRSDTIN TQTNEENKK
101: DHQFASSSNS SSFSFDAFPL PNNNNNTSFF TDLPLPQAES SEVVNTTPTS PNSTSVSSSS NEAANDNNSG KEVTVKDQEE GDQQQEQKGT KPQLKAKKKN
201: QKKAREARFA FLTKSDIDNL DDGYRWRKYG QKAVKNSPYP RSYYRCTTVG CGVKKRVERS SDDPSIVMTT YEGQHTHPFP MTPRGHIGML TSPILDHGAT
301: TASSSSFSIP QPRYLLTQHH QPYNMYNNNS LSMINRRSSD GTFVNPGPSS SFPGFGYDMS QASTSTSSSI RDHGLLQDIL PSQIRSDTIN TQTNEENKK
Arabidopsis Description
WRKY48Probable WRKY transcription factor 48 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGZ4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.