Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY23453 | Canola | nucleus | 94.09 | 94.95 |
| AT2G44745.1 | Thale cress | nucleus | 91.82 | 92.66 |
| CDX95615 | Canola | nucleus, plastid | 80.0 | 92.63 |
| CDX83415 | Canola | nucleus, plastid | 78.18 | 91.49 |
| CDY71963 | Canola | nucleus | 88.64 | 91.12 |
| CDY48258 | Canola | nucleus | 87.73 | 89.77 |
| Bra000362.1-P | Field mustard | nucleus | 84.55 | 88.57 |
| GSMUA_Achr4P17890_001 | Banana | nucleus | 40.45 | 79.46 |
| GSMUA_Achr7P06860_001 | Banana | nucleus | 40.91 | 76.92 |
| CDY72079 | Canola | nucleus | 33.64 | 66.67 |
| KRH66475 | Soybean | nucleus | 58.64 | 54.2 |
| KRH48843 | Soybean | nucleus | 57.73 | 53.59 |
| Solyc01g089960.2.1 | Tomato | nucleus | 57.27 | 53.39 |
| KRH40189 | Soybean | nucleus | 55.0 | 50.84 |
| PGSC0003DMT400080069 | Potato | nucleus | 56.36 | 49.4 |
| HORVU6Hr1G061940.1 | Barley | nucleus | 46.36 | 44.93 |
| TraesCS2A01G392100.1 | Wheat | nucleus | 45.91 | 44.1 |
| HORVU2Hr1G093350.3 | Barley | nucleus | 45.91 | 43.91 |
| TraesCS2B01G410400.1 | Wheat | nucleus | 45.45 | 43.67 |
| TraesCS2D01G390200.1 | Wheat | nucleus | 45.45 | 43.67 |
| Zm00001d017444_P001 | Maize | extracellular, vacuole | 45.45 | 43.29 |
| TraesCS6B01G282500.1 | Wheat | nucleus | 46.36 | 43.22 |
| TraesCS6A01G242000.1 | Wheat | nucleus | 46.36 | 43.22 |
| TraesCS6D01G223900.1 | Wheat | cytosol | 46.36 | 43.22 |
| Zm00001d051328_P002 | Maize | nucleus | 45.91 | 42.98 |
| KXG31104 | Sorghum | nucleus | 46.36 | 42.86 |
| CDX77096 | Canola | nucleus | 26.36 | 40.28 |
| Os04t0545000-01 | Rice | cytosol | 45.45 | 40.0 |
| KXG26824 | Sorghum | nucleus | 45.45 | 37.17 |
| CDX70492 | Canola | nucleus | 23.18 | 34.69 |
| CDX78504 | Canola | nucleus | 23.18 | 34.69 |
| Zm00001d002794_P001 | Maize | nucleus | 44.55 | 34.51 |
| CDX69672 | Canola | nucleus | 22.73 | 34.01 |
| CDX97223 | Canola | nucleus | 22.27 | 33.33 |
| CDY24990 | Canola | nucleus | 25.45 | 33.14 |
| CDY05537 | Canola | nucleus | 25.0 | 32.74 |
| CDX87064 | Canola | nucleus | 24.55 | 31.58 |
| CDY41978 | Canola | nucleus | 42.73 | 31.54 |
| CDY53184 | Canola | nucleus | 41.82 | 31.4 |
| CDX88219 | Canola | nucleus | 25.0 | 31.25 |
| CDY48151 | Canola | nucleus | 24.09 | 30.99 |
| CDX72701 | Canola | nucleus | 39.55 | 30.85 |
| CDY39732 | Canola | nucleus | 24.55 | 30.68 |
| CDY52627 | Canola | nucleus | 24.55 | 30.68 |
| CDY44466 | Canola | nucleus | 24.55 | 30.68 |
| CDY12144 | Canola | nucleus | 40.45 | 30.17 |
| CDY38208 | Canola | nucleus | 24.55 | 29.03 |
| CDY34393 | Canola | nucleus | 25.0 | 28.95 |
| CDY55479 | Canola | nucleus | 24.09 | 28.49 |
| CDY18694 | Canola | nucleus | 22.27 | 28.32 |
| CDY25554 | Canola | nucleus | 24.09 | 28.19 |
| CDY14512 | Canola | nucleus | 24.55 | 26.21 |
| CDY08849 | Canola | nucleus | 24.55 | 26.21 |
| CDY31301 | Canola | nucleus | 23.18 | 25.89 |
| CDX81259 | Canola | nucleus | 22.73 | 25.13 |
| CDX99859 | Canola | nucleus | 30.0 | 24.18 |
| CDY43194 | Canola | nucleus | 30.0 | 23.83 |
| CDY26310 | Canola | nucleus | 29.55 | 23.81 |
| CDX76541 | Canola | nucleus | 31.82 | 23.81 |
| CDY08894 | Canola | nucleus | 31.36 | 23.47 |
| CDX98155 | Canola | nucleus | 30.0 | 23.24 |
| CDY09083 | Canola | nucleus | 31.82 | 22.36 |
| CDX90417 | Canola | nucleus | 31.82 | 22.36 |
| CDX99495 | Canola | nucleus | 31.36 | 22.12 |
| CDX78832 | Canola | nucleus | 30.91 | 22.08 |
| CDY01523 | Canola | nucleus | 30.91 | 21.79 |
| CDY40910 | Canola | nucleus | 29.09 | 21.77 |
| CDY54139 | Canola | nucleus | 29.09 | 21.48 |
| CDX95947 | Canola | nucleus | 28.64 | 21.43 |
| CDY04276 | Canola | nucleus | 27.73 | 21.25 |
| CDY43969 | Canola | nucleus | 30.45 | 21.14 |
| CDY07352 | Canola | nucleus | 27.73 | 21.11 |
| CDX87722 | Canola | nucleus | 29.55 | 20.77 |
| CDY37794 | Canola | nucleus | 29.55 | 20.77 |
| CDX77655 | Canola | nucleus | 30.45 | 20.74 |
| CDY33471 | Canola | nucleus | 30.45 | 20.74 |
| CDX80094 | Canola | nucleus | 29.55 | 20.57 |
| CDY03224 | Canola | nucleus | 30.0 | 20.56 |
| CDY35159 | Canola | nucleus | 29.55 | 20.25 |
| CDX76630 | Canola | nucleus | 27.27 | 20.2 |
| CDY50313 | Canola | nucleus | 28.18 | 20.06 |
| CDY11416 | Canola | nucleus | 26.82 | 19.8 |
| CDY72613 | Canola | nucleus | 28.18 | 19.2 |
| CDY51420 | Canola | nucleus | 28.18 | 19.14 |
| CDY27500 | Canola | nucleus | 28.18 | 18.62 |
| CDY05620 | Canola | nucleus | 30.45 | 17.14 |
| CDY46824 | Canola | nucleus | 21.82 | 16.55 |
| CDX85413 | Canola | nucleus | 30.0 | 16.54 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078H0Y9 | UniProt:A0A078H0Y9 | EnsemblPlants:CDY30483 | ProteinID:CDY30483 |
| ProteinID:CDY30483.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00045191001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF17 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EE2B76 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaA04g25840DBnaA04g25840D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H0Y9]
Coordinates
chrLK032253:-:443476..445120
Molecular Weight (calculated)
24898.0 Da
IEP (calculated)
8.403
GRAVY (calculated)
-0.766
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGRRVVVN NYDLQQVTSS ATIQENMNFL VPFEETNVLT FFSSSSSSSL PSPSFPIHNS SSTTNTTHAP LGFSNNLQVG GPLGSKVVND DHENIGGGIN
101: NDVHSNSCDC ICRWRSSGEM KNKVKIRRKL REPRFCFQTK SDVDVLDDGY KWRKYGQKVV KNSLHPRSYY RCTHNNCRVK KRVERLSEDC RMVITTYEGR
201: HNHIPSDDST SPDHDCLSSF
101: NDVHSNSCDC ICRWRSSGEM KNKVKIRRKL REPRFCFQTK SDVDVLDDGY KWRKYGQKVV KNSLHPRSYY RCTHNNCRVK KRVERLSEDC RMVITTYEGR
201: HNHIPSDDST SPDHDCLSSF
001: MEGGGRRVFS NYDLQQVTSS STTIQENMNF LVPFEETNVL TFFSSSSSSS LSSPSFPIHN SSSTTTTHAP LGFSNNLQGG GPLGSKVVND DQENFGGGTN
101: NDAHSNSWWR SNSGSGDMKN KVKIRRKLRE PRFCFQTKSD VDVLDDGYKW RKYGQKVVKN SLHPRSYYRC THNNCRVKKR VERLSEDCRM VITTYEGRHN
201: HIPSDDSTSP DHDCLSSF
101: NDAHSNSWWR SNSGSGDMKN KVKIRRKLRE PRFCFQTKSD VDVLDDGYKW RKYGQKVVKN SLHPRSYYRC THNNCRVKKR VERLSEDCRM VITTYEGRHN
201: HIPSDDSTSP DHDCLSSF
Arabidopsis Description
WRKY12At2g44745 [Source:UniProtKB/TrEMBL;Acc:Q1PEU5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.