Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G392100.1 | Wheat | nucleus | 96.52 | 96.94 |
| TraesCS2D01G390200.1 | Wheat | nucleus | 96.09 | 96.51 |
| TraesCS2B01G410400.1 | Wheat | nucleus | 93.48 | 93.89 |
| GSMUA_Achr4P17890_001 | Banana | nucleus | 39.57 | 81.25 |
| KXG26824 | Sorghum | nucleus | 77.39 | 66.17 |
| Zm00001d002794_P001 | Maize | nucleus | 75.65 | 61.27 |
| HORVU6Hr1G061940.1 | Barley | nucleus | 53.91 | 54.63 |
| CDX83415 | Canola | nucleus, plastid | 40.0 | 48.94 |
| CDX95615 | Canola | nucleus, plastid | 40.0 | 48.42 |
| KRH66475 | Soybean | nucleus | 49.13 | 47.48 |
| AT2G44745.1 | Thale cress | nucleus | 44.78 | 47.25 |
| KRH48843 | Soybean | nucleus | 48.26 | 46.84 |
| CDY71963 | Canola | nucleus | 43.48 | 46.73 |
| CDY48258 | Canola | nucleus | 43.48 | 46.51 |
| Bra004864.1-P | Field mustard | nucleus | 43.48 | 46.51 |
| CDY23453 | Canola | nucleus | 43.91 | 46.33 |
| Bra000362.1-P | Field mustard | nucleus | 42.17 | 46.19 |
| Solyc01g089960.2.1 | Tomato | nucleus | 47.39 | 46.19 |
| CDY30483 | Canola | nucleus | 43.91 | 45.91 |
| PGSC0003DMT400080069 | Potato | nucleus | 47.83 | 43.82 |
| KRH40189 | Soybean | nucleus | 44.35 | 42.86 |
| HORVU3Hr1G021120.1 | Barley | nucleus, plastid | 39.13 | 34.09 |
| HORVU2Hr1G001780.1 | Barley | nucleus | 28.26 | 33.16 |
| HORVU3Hr1G069660.1 | Barley | nucleus | 26.52 | 26.41 |
| HORVU1Hr1G027700.1 | Barley | nucleus | 21.74 | 25.13 |
| HORVU0Hr1G001430.1 | Barley | plastid | 22.61 | 23.85 |
| HORVU3Hr1G067510.1 | Barley | mitochondrion, plastid | 21.74 | 23.58 |
| HORVU0Hr1G003340.1 | Barley | nucleus | 26.96 | 21.75 |
| HORVU1Hr1G081570.1 | Barley | plastid | 28.7 | 21.57 |
| HORVU1Hr1G092130.1 | Barley | nucleus | 28.7 | 21.36 |
| HORVU3Hr1G050590.3 | Barley | nucleus | 23.48 | 20.3 |
| HORVU5Hr1G096420.20 | Barley | mitochondrion, nucleus | 26.52 | 20.2 |
| HORVU1Hr1G088300.1 | Barley | nucleus | 25.22 | 20.14 |
| HORVU1Hr1G080300.1 | Barley | nucleus | 24.35 | 20.07 |
| HORVU3Hr1G020140.1 | Barley | mitochondrion | 20.87 | 19.51 |
| HORVU3Hr1G060500.1 | Barley | nucleus | 28.7 | 18.13 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:A0A287IZ53 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:HORVU2Hr1G093350 | EnsemblPlants:HORVU2Hr1G093350.3 | InterPro:IPR003657 | InterPro:IPR036576 |
| PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF17 | SMART:SM00774 | SUPFAM:SSF118290 |
| UniParc:UPI000B4603FE | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr2H:+:657822746..657827015
Molecular Weight (calculated)
25129.7 Da
IEP (calculated)
8.637
GRAVY (calculated)
-0.594
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGSQLGAC LPSLYALDPY ASPPLLAPLP NQHKLHQMPL VLQEQPGNHG VMFSSDHGGG LYPLLPGIPF CHSAASLEKP TGFAPLGGTG EAGTSAARAG
101: NEIAATTTTT TTASCHGPSS WWKGAEKGKM KVRRKMREPR FCFQTRSEVD VLDDGYKWRK YGQKVVKNSL HPRSYYRCTH SNCRVKKRVE RLSEDCRMVI
201: TTYEGRHTHT PCSDDDAGGD HTGSCTFTSF
101: NEIAATTTTT TTASCHGPSS WWKGAEKGKM KVRRKMREPR FCFQTRSEVD VLDDGYKWRK YGQKVVKNSL HPRSYYRCTH SNCRVKKRVE RLSEDCRMVI
201: TTYEGRHTHT PCSDDDAGGD HTGSCTFTSF
001: MEGGGRRVFS NYDLQQVTSS STTIQENMNF LVPFEETNVL TFFSSSSSSS LSSPSFPIHN SSSTTTTHAP LGFSNNLQGG GPLGSKVVND DQENFGGGTN
101: NDAHSNSWWR SNSGSGDMKN KVKIRRKLRE PRFCFQTKSD VDVLDDGYKW RKYGQKVVKN SLHPRSYYRC THNNCRVKKR VERLSEDCRM VITTYEGRHN
201: HIPSDDSTSP DHDCLSSF
101: NDAHSNSWWR SNSGSGDMKN KVKIRRKLRE PRFCFQTKSD VDVLDDGYKW RKYGQKVVKN SLHPRSYYRC THNNCRVKKR VERLSEDCRM VITTYEGRHN
201: HIPSDDSTSP DHDCLSSF
Arabidopsis Description
WRKY12At2g44745 [Source:UniProtKB/TrEMBL;Acc:Q1PEU5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.