Factsheet for HORVU1Hr1G027700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
nucleus 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G122400.1	Wheat	nucleus	89.45	91.75
TraesCS1A01G121500.1	Wheat	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	79.4	80.61
KRH15622	Soybean	nucleus	24.12	70.59
Zm00001d037607_P001	Maize	nucleus	64.32	65.64
EES19157	Sorghum	nucleus	66.83	64.56
Zm00001d009939_P001	Maize	nucleus	63.32	61.46
Os05t0183100-01	Rice	nucleus	58.29	54.72
KRH61557	Soybean	nucleus	35.68	44.1
VIT_04s0008g01470.t01	Wine grape	nucleus	35.18	42.17
KRH52231	Soybean	nucleus	33.17	40.99
GSMUA_Achr7P09680_001	Banana	nucleus	39.7	39.11
KRH05396	Soybean	nucleus	32.16	39.02
HORVU3Hr1G020140.1	Barley	mitochondrion	46.73	37.8
HORVU0Hr1G001430.1	Barley	plastid	40.7	37.16
Solyc08g062490.2.1	Tomato	nucleus	33.67	37.02
CDX87064	Canola	nucleus	31.66	36.84
CDY48151	Canola	nucleus	30.65	35.67
HORVU3Hr1G067510.1	Barley	mitochondrion, plastid	37.69	35.38
AT5G26170.1	Thale cress	nucleus	30.65	35.26
Bra009885.1-P	Field mustard	nucleus	31.16	35.23
CDX88219	Canola	nucleus	31.16	35.23
Bra020546.1-P	Field mustard	nucleus	29.15	34.52
CDY24990	Canola	nucleus	29.15	34.32
CDY52627	Canola	nucleus	30.15	34.09
CDY05537	Canola	nucleus	28.64	33.93
Bra036563.1-P	Field mustard	nucleus	25.13	31.65
PGSC0003DMT400021144	Potato	nucleus	18.59	28.91
HORVU3Hr1G050590.3	Barley	nucleus	36.18	27.07
HORVU1Hr1G080300.1	Barley	nucleus	37.69	26.88
HORVU2Hr1G001780.1	Barley	nucleus	25.63	26.02
HORVU3Hr1G069660.1	Barley	nucleus	29.65	25.54
HORVU6Hr1G061940.1	Barley	nucleus	25.13	22.03
HORVU2Hr1G093350.3	Barley	nucleus	25.13	21.74
HORVU3Hr1G021120.1	Barley	nucleus, plastid	25.13	18.94
HORVU1Hr1G092130.1	Barley	nucleus	28.64	18.45
HORVU0Hr1G003340.1	Barley	nucleus	26.13	18.25
HORVU1Hr1G081570.1	Barley	plastid	27.14	17.65
HORVU1Hr1G088300.1	Barley	nucleus	23.12	15.97
HORVU5Hr1G096420.20	Barley	mitochondrion, nucleus	24.12	15.89
HORVU3Hr1G060500.1	Barley	nucleus	26.13	14.29

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EMBL:AK357196	UniProt:F2CZY9	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:HORVU1Hr1G027700	EnsemblPlants:HORVU1Hr1G027700.1	InterPro:IPR003657
InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF43	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000200555E	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CZY9]

Coordinates

chrchr1H:+:143405694..143407012

Molecular Weight (calculated)

22035.4 Da

IEP (calculated)

6.872

GRAVY (calculated)

-0.652

Length

199 amino acids

Sequence
(BLAST)

001: MAASLGLNPE AVFSSAFAYS SPFVADHCAP PARAVVDDTD YAAQLDLHDD HQHYPFDQFE YSPPTPTAQI SFAGAGDDEH RSEKTIKIST RVSAGRIGFR
101: TRSEVEILDD GFKWRKYGKK AVKNSPNPRN YYRCSAEGCG VKKRVERDRD DPRYVVTTYD GVHNHATPGA AEQYYCYSPP RSVVSSPPTA YSAAGLLQF

Best Arabidopsis Sequence Match ( AT5G26170.1 )
(BLAST)

001: MNDADTNLGS SFSDDTHSVF EFPELDLSDE WMDDDLVSAV SGMNQSYGYQ TSDVAGALFS GSSSCFSHPE SPSTKTYVAA TATASADNQN KKEKKKIKGR
101: VAFKTRSEVE VLDDGFKWRK YGKKMVKNSP HPRNYYKCSV DGCPVKKRVE RDRDDPSFVI TTYEGSHNHS SMN

Arabidopsis Description

WRKY50Probable WRKY transcription factor 50 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWQ5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.