Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- peroxisome 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH15622 | Soybean | nucleus | 31.33 | 76.47 |
| GSMUA_Achr3P20450_001 | Banana | cytosol, nucleus, plastid | 34.94 | 61.7 |
| KRH61557 | Soybean | nucleus | 56.63 | 58.39 |
| KRH05396 | Soybean | nucleus | 54.82 | 55.49 |
| KRH52231 | Soybean | nucleus | 53.01 | 54.66 |
| VIT_04s0069g00980.t01 | Wine grape | nucleus | 32.53 | 53.47 |
| CDX87064 | Canola | nucleus | 48.8 | 47.37 |
| CDY48151 | Canola | nucleus | 48.19 | 46.78 |
| Bra020546.1-P | Field mustard | nucleus | 46.99 | 46.43 |
| Solyc08g062490.2.1 | Tomato | nucleus | 50.6 | 46.41 |
| AT5G26170.1 | Thale cress | nucleus | 48.19 | 46.24 |
| CDY05537 | Canola | nucleus | 46.39 | 45.83 |
| CDY24990 | Canola | nucleus | 46.39 | 45.56 |
| CDX88219 | Canola | nucleus | 48.19 | 45.45 |
| CDY52627 | Canola | nucleus | 48.19 | 45.45 |
| Bra009885.1-P | Field mustard | nucleus | 47.59 | 44.89 |
| VIT_07s0031g01710.t01 | Wine grape | nucleus | 46.39 | 42.78 |
| Bra036563.1-P | Field mustard | nucleus | 40.36 | 42.41 |
| VIT_04s0069g00970.t01 | Wine grape | nucleus | 38.55 | 41.03 |
| PGSC0003DMT400021144 | Potato | nucleus | 30.72 | 39.84 |
| Zm00001d037607_P001 | Maize | nucleus | 42.77 | 36.41 |
| GSMUA_Achr7P09680_001 | Banana | nucleus | 43.98 | 36.14 |
| TraesCS1D01G122400.1 | Wheat | nucleus | 41.57 | 35.57 |
| HORVU1Hr1G027700.1 | Barley | nucleus | 42.17 | 35.18 |
| Zm00001d009939_P001 | Maize | nucleus | 43.37 | 35.12 |
| EES19157 | Sorghum | nucleus | 43.37 | 34.95 |
| EES18577 | Sorghum | plastid | 45.78 | 34.7 |
| Zm00001d011133_P001 | Maize | plastid | 40.96 | 34.69 |
| TraesCS3B01G277300.1 | Wheat | plastid | 41.57 | 34.5 |
| TraesCS1A01G121500.1 | Wheat | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 40.36 | 34.18 |
| TraesCS3A01G248700.1 | Wheat | plastid | 41.57 | 33.99 |
| Os05t0537100-00 | Rice | cytosol, plastid | 45.18 | 33.94 |
| Os05t0183100-01 | Rice | nucleus | 42.77 | 33.49 |
| TraesCS1B01G374900.1 | Wheat | plastid | 43.98 | 33.18 |
| TraesCS3D01G248500.1 | Wheat | mitochondrion | 40.96 | 33.17 |
| Os01t0186000-01 | Rice | cytosol, nucleus | 38.55 | 33.16 |
| Zm00001d038843_P001 | Maize | plastid | 43.98 | 33.03 |
| HORVU0Hr1G001430.1 | Barley | plastid | 43.37 | 33.03 |
| TraesCS1A01G358100.1 | Wheat | nucleus, plastid | 43.37 | 32.73 |
| TraesCS1D01G362900.1 | Wheat | nucleus, plastid | 43.37 | 32.73 |
| VIT_17s0000g01280.t01 | Wine grape | nucleus | 29.52 | 32.45 |
| TraesCS1B01G374700.1 | Wheat | nucleus, plastid | 43.37 | 32.29 |
| TraesCS1A01G358400.1 | Wheat | plastid | 42.77 | 32.27 |
| HORVU3Hr1G067510.1 | Barley | mitochondrion, plastid | 40.96 | 32.08 |
| TraesCS1D01G363300.1 | Wheat | plastid | 42.77 | 31.84 |
| Zm00001d043663_P001 | Maize | plastid | 40.36 | 31.75 |
| TraesCS3A01G111200.1 | Wheat | nucleus | 40.36 | 29.78 |
| TraesCS3B01G129900.1 | Wheat | nucleus | 39.76 | 29.73 |
| TraesCS3D01G113200.1 | Wheat | nucleus | 39.76 | 29.6 |
| KXG33244 | Sorghum | plastid | 39.76 | 29.33 |
| HORVU3Hr1G020140.1 | Barley | mitochondrion | 42.17 | 28.46 |
| Os01t0714800-01 | Rice | plastid | 41.57 | 28.16 |
| VIT_01s0010g03930.t01 | Wine grape | nucleus, plastid | 30.12 | 26.45 |
| HORVU1Hr1G080300.1 | Barley | nucleus | 43.37 | 25.81 |
| Zm00001d008793_P001 | Maize | nucleus | 35.54 | 25.76 |
| VIT_14s0068g01770.t01 | Wine grape | nucleus | 27.71 | 25.27 |
| VIT_07s0031g01840.t01 | Wine grape | nucleus | 34.34 | 25.22 |
| VIT_15s0046g02150.t01 | Wine grape | nucleus, plastid | 30.12 | 24.88 |
| EES00157 | Sorghum | nucleus | 36.75 | 23.46 |
| Zm00001d039531_P001 | Maize | nucleus | 36.75 | 22.34 |
| VIT_12s0028g00270.t01 | Wine grape | nucleus | 40.96 | 21.86 |
| VIT_10s0003g02810.t01 | Wine grape | nucleus | 39.76 | 20.69 |
| VIT_05s0077g00730.t01 | Wine grape | nucleus | 37.35 | 20.06 |
| VIT_07s0005g01710.t01 | Wine grape | nucleus | 36.14 | 19.87 |
| VIT_01s0011g00720.t01 | Wine grape | nucleus | 36.14 | 19.67 |
Protein Annotations
| EntrezGene:100266400 | wikigene:100266400 | MapMan:15.5.22 | Gene3D:2.20.25.80 | EMBL:AM431949 | ProteinID:CAN73664 |
| ProteinID:CAN73664.1 | ProteinID:CBI20684 | ProteinID:CBI20684.3 | UniProt:D7STT5 | EMBL:FN595231 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009605 |
| GO:GO:0009607 | GO:GO:0009719 | GO:GO:0009867 | GO:GO:0009987 | GO:GO:0043565 | GO:GO:0050832 |
| InterPro:IPR003657 | InterPro:IPR036576 | EntrezGene:LOC100266400 | wikigene:LOC100266400 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31221 | PANTHER:PTHR31221:SF48 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI00015C8C7E | ArrayExpress:VIT_04s0008g01470 |
| EnsemblPlantsGene:VIT_04s0008g01470 | EnsemblPlants:VIT_04s0008g01470.t01 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | RefSeq:XP_002279407 | RefSeq:XP_002279407.1 |
Description
No Description!
Coordinates
chr4:-:1210142..1211252
Molecular Weight (calculated)
18917.6 Da
IEP (calculated)
4.995
GRAVY (calculated)
-1.122
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MADTTAGSQD SPEAESDFEL GDTSNFELSE YLLFDDLMEE DHSAFLASEF AQNPIHPGNE VDKPGSSSSQ HERPASRNSE SGQKKKEAKE RVAFITKSEI
101: EILDDGFKWR KYGKKMVKNS PNPRNYYRCS VDGCNVKKRV ERDREDPKYV ITTYEGIHNH ESPSKF
101: EILDDGFKWR KYGKKMVKNS PNPRNYYRCS VDGCNVKKRV ERDREDPKYV ITTYEGIHNH ESPSKF
001: MNDADTNLGS SFSDDTHSVF EFPELDLSDE WMDDDLVSAV SGMNQSYGYQ TSDVAGALFS GSSSCFSHPE SPSTKTYVAA TATASADNQN KKEKKKIKGR
101: VAFKTRSEVE VLDDGFKWRK YGKKMVKNSP HPRNYYKCSV DGCPVKKRVE RDRDDPSFVI TTYEGSHNHS SMN
101: VAFKTRSEVE VLDDGFKWRK YGKKMVKNSP HPRNYYKCSV DGCPVKKRVE RDRDDPSFVI TTYEGSHNHS SMN
Arabidopsis Description
WRKY50Probable WRKY transcription factor 50 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.