CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038843_P001	Maize	plastid	89.5	88.69
Os05t0537100-00	Rice	cytosol, plastid	77.63	76.92
GSMUA_Achr3P20450_001	Banana	cytosol, nucleus, plastid	32.88	76.6
KRH15622	Soybean	nucleus	22.83	73.53
TraesCS1B01G374900.1	Wheat	plastid	71.69	71.36
TraesCS1D01G362900.1	Wheat	nucleus, plastid	71.23	70.91
TraesCS1A01G358400.1	Wheat	plastid	71.23	70.91
TraesCS1A01G358100.1	Wheat	nucleus, plastid	70.32	70.0
TraesCS1D01G363300.1	Wheat	plastid	70.78	69.51
HORVU0Hr1G001430.1	Barley	plastid	68.04	68.35
TraesCS1B01G374700.1	Wheat	nucleus, plastid	69.41	68.16
HORVU1Hr1G080300.1	Barley	nucleus	67.12	52.69
KXG33244	Sorghum	plastid	50.23	48.89
VIT_04s0008g01470.t01	Wine grape	nucleus	34.7	45.78
KRH61557	Soybean	nucleus	32.88	44.72
KRH52231	Soybean	nucleus	31.96	43.48
KRH05396	Soybean	nucleus	32.42	43.29
EES19157	Sorghum	nucleus	39.27	41.75
Solyc08g062490.2.1	Tomato	nucleus	32.42	39.23
CDY48151	Canola	nucleus	30.59	39.18
CDX87064	Canola	nucleus	30.59	39.18
AT5G26170.1	Thale cress	nucleus	30.59	38.73
Bra009885.1-P	Field mustard	nucleus	30.59	38.07
CDX88219	Canola	nucleus	30.59	38.07
CDY52627	Canola	nucleus	30.14	37.5
Bra020546.1-P	Field mustard	nucleus	28.77	37.5
CDY05537	Canola	nucleus	28.31	36.9
CDY24990	Canola	nucleus	28.31	36.69
Bra036563.1-P	Field mustard	nucleus	26.03	36.08
EES00970	Sorghum	nucleus	32.88	33.33
PGSC0003DMT400021144	Potato	nucleus	18.26	31.25
EES00157	Sorghum	nucleus	31.96	26.92
EES08501	Sorghum	nucleus	25.57	24.89
EES01425	Sorghum	nucleus	25.57	22.76
KXG31104	Sorghum	nucleus	24.2	22.27
KXG26824	Sorghum	nucleus	26.94	21.93
EES19853	Sorghum	nucleus, plastid	23.74	21.58
OQU78504	Sorghum	nucleus	24.2	20.23
KXG34273	Sorghum	mitochondrion	23.29	18.75
OQU86187	Sorghum	mitochondrion, nucleus	24.66	18.31
EES01107	Sorghum	nucleus	28.77	17.45
EER90854	Sorghum	nucleus	24.2	16.01
EES03393	Sorghum	nucleus	26.94	14.39
EES18690	Sorghum	nucleus	27.85	14.39

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EntrezGene:8061067	UniProt:C5YUJ2	EnsemblPlants:EES18577	ProteinID:EES18577
ProteinID:EES18577.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF81
SMART:SM00774	EnsemblPlantsGene:SORBI_3009G212800	SUPFAM:SSF118290	unigene:Sbi.12209	UniParc:UPI0001A88CCD	InterPro:WRKY_dom
InterPro:WRKY_dom_sf	RefSeq:XP_002440147.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:55836119..55837874

Molecular Weight (calculated)

22718.0 Da

IEP (calculated)

6.516

GRAVY (calculated)

-0.324

Length

219 amino acids

Sequence
(BLAST)

001: MAAVGARPVL YHHPAPAGDA ASMSSYFSQG GSSTTSSSAS ASFSAALAPT TTTLAEQFDI SEFLFDDAGV AGAPGVFADG SAPVVVSDAA AAAGGGAISA
101: AAGSAAAAAE AVPERPRTER IAFRTRSEIE ILDDGYKWRK YGKKSVKNSP NPRNYYRCST EGCNVKKRVE RDRDDPSYVV TTYEGTHNHV SPSTVYYASQ
201: DAASGRFFVA GTQPPGSLN

Best Arabidopsis Sequence Match ( AT5G64810.1 )
(BLAST)

001: MNISQNPSPN FTYFSDENFI NPFMDNNDFS NLMFFDIDEG GNNGLIEEEI SSPTSIVSSE TFTGESGGSG SATTLSKKES TNRGSKESDQ TKETGHRVAF
101: RTRSKIDVMD DGFKWRKYGK KSVKNNINKR NYYKCSSEGC SVKKRVERDG DDAAYVITTY EGVHNHESLS NVYYNEMVLS YDHDNWNQHS LLRS

Arabidopsis Description

WRKY51Probable WRKY transcription factor 51 [Source:UniProtKB/Swiss-Prot;Acc:Q93WU9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.