CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039032_P001	Maize	nucleus	73.35	76.23
HORVU1Hr1G088300.1	Barley	nucleus	41.51	61.11
Os05t0565900-00	Rice	nucleus	58.96	59.67
TraesCS1A01G401800.1	Wheat	nucleus	53.3	56.78
EES03393	Sorghum	nucleus	50.71	52.44
GSMUA_Achr3P31310_001	Banana	nucleus	24.53	45.41
GSMUA_Achr6P22160_001	Banana	nucleus	32.08	38.75
KXG34273	Sorghum	mitochondrion	24.29	37.87
GSMUA_Achr1P04770_001	Banana	nucleus	26.42	37.84
GSMUA_Achr7P25400_001	Banana	nucleus	28.77	37.42
OQU78504	Sorghum	nucleus	22.17	35.88
GSMUA_Achr4P02800_001	Banana	nucleus	27.59	35.56
EES01107	Sorghum	nucleus	30.19	35.46
Solyc02g071130.2.1	Tomato	nucleus	26.18	35.02
PGSC0003DMT400025113	Potato	nucleus	26.18	34.91
GSMUA_Achr4P14990_001	Banana	nucleus	26.89	34.34
EES08501	Sorghum	nucleus	17.45	32.89
EER90854	Sorghum	nucleus	25.24	32.33
KXG31104	Sorghum	nucleus	16.27	28.99
EES00970	Sorghum	nucleus	14.39	28.24
EES19157	Sorghum	nucleus	13.68	28.16
EES18577	Sorghum	plastid	14.39	27.85
EES19853	Sorghum	nucleus, plastid	15.8	27.8
EES01425	Sorghum	nucleus	15.33	26.42
GSMUA_Achr4P07920_001	Banana	nucleus	29.95	26.08
KXG26824	Sorghum	nucleus	16.51	26.02
EES00157	Sorghum	nucleus	14.86	24.23
KXG33244	Sorghum	plastid	12.74	24.0
OQU86187	Sorghum	mitochondrion, nucleus	15.57	22.37

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EntrezGene:8074604	UniProt:C5YVV8	EnsemblPlants:EES18690	ProteinID:EES18690
ProteinID:EES18690.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF83
SMART:SM00774	EnsemblPlantsGene:SORBI_3009G234100	SUPFAM:SSF118290	unigene:Sbi.6627	UniParc:UPI0001A88E4A	InterPro:WRKY_dom
InterPro:WRKY_dom_sf	RefSeq:XP_002440260.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:57342319..57345920

Molecular Weight (calculated)

44451.7 Da

IEP (calculated)

6.883

GRAVY (calculated)

-0.553

Length

424 amino acids

Sequence
(BLAST)

001: MSGARHEHHL SGDFQFHDEL ASLFAHQRPD AAPMAQPWFM DYLHATAAAA SPLDCDAFVG DFIDVPAVAA DEVVKRELVM VDTAAAGSGG GTPTPTTAPL
101: TPNSMSMSST SSEACGAGAG AGEESAAGKC KKEDGEEEGL ESKDDGSAAG KGDGGEGEEK NKKGAANKGK GKGEKRPRQP RFAFMTKSEV DHLEDGYRWR
201: KYGQKAVKNS PFPRSYYRCT TQKCPVKKRV ERSYQDAAVV ITTYEGKHTH PIPATLRGSS HLLAAAHHHP MGGLHHVHPH FRMAPPPPPA ALGGFRPGGG
301: ANAFDALGLG LLQPPSSSQQ QQQGHHHHHG AAAMQQLAVS GGAAGVQQVN AAAAMASHAA LPDDGDQHGL AAIAGAAGTT TAATTAASAP LRMQHFMAQD
401: YAGLLQDMFP SFVHSDDDGH HHHH

Best Arabidopsis Sequence Match ( AT1G29860.1 )
(BLAST)

001: MDDHVEHNYN TSLEEVHFKS LSDCLQSSLV MDYNSLEKVF KFSPYSSPFQ SVSPSVNNPY LNLTSNSPVV SSSSNEGEPK ENTNDKSDQM EDNEGDLHGV
101: GESSKQLTKQ GKKKGEKKER EVRVAFMTKS EIDHLEDGYR WRKYGQKAVK NSPYPRSYYR CTTQKCNVKK RVERSFQDPS IVITTYEGKH NHPIPSTLRG
201: TVAAEHLLVH RGGGGSLLHS FPRHHQDFLM MKHSPANYQS VGSLSYEHGH GTSSYNFNNN QPVVDYGLLQ DIVPSMFSKN ES

Arabidopsis Description

WRKY71Probable WRKY transcription factor 71 [Source:UniProtKB/Swiss-Prot;Acc:Q93WV4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.