Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P06260_001 | Banana | nucleus | 24.89 | 55.34 |
| GSMUA_Achr4P17890_001 | Banana | nucleus | 26.64 | 54.46 |
| GSMUA_Achr7P06860_001 | Banana | nucleus | 26.64 | 52.14 |
| GSMUA_Achr3P20450_001 | Banana | cytosol, nucleus, plastid | 20.09 | 48.94 |
| GSMUA_Achr6P34870_001 | Banana | nucleus | 30.13 | 46.62 |
| GSMUA_Achr9P07230_001 | Banana | mitochondrion | 22.27 | 44.35 |
| GSMUA_Achr7P00580_001 | Banana | cytosol, nucleus, plastid | 27.07 | 41.61 |
| GSMUA_Achr6P22160_001 | Banana | nucleus | 62.88 | 41.03 |
| GSMUA_AchrUn_... | Banana | nucleus | 44.98 | 35.76 |
| GSMUA_Achr9P29350_001 | Banana | nucleus | 24.02 | 34.59 |
| GSMUA_Achr7P25400_001 | Banana | nucleus | 48.47 | 34.05 |
| GSMUA_Achr1P04770_001 | Banana | nucleus | 42.79 | 33.11 |
| GSMUA_AchrUn_... | Banana | nucleus | 25.33 | 32.77 |
| GSMUA_Achr6P27090_001 | Banana | nucleus | 42.79 | 32.67 |
| GSMUA_Achr9P01400_001 | Banana | nucleus | 25.76 | 32.6 |
| HORVU1Hr1G088300.1 | Barley | nucleus | 40.61 | 32.29 |
| GSMUA_AchrUn_... | Banana | nucleus | 41.92 | 31.89 |
| GSMUA_Achr7P24780_001 | Banana | nucleus | 24.89 | 31.67 |
| GSMUA_Achr4P14990_001 | Banana | nucleus | 45.85 | 31.63 |
| GSMUA_Achr9P06750_001 | Banana | nucleus | 40.61 | 31.53 |
| GSMUA_Achr4P02800_001 | Banana | nucleus | 44.98 | 31.31 |
| GSMUA_Achr6P06360_001 | Banana | nucleus | 24.89 | 30.98 |
| Solyc02g071130.2.1 | Tomato | nucleus | 42.36 | 30.6 |
| PGSC0003DMT400025113 | Potato | nucleus | 41.92 | 30.19 |
| Zm00001d043950_P001 | Maize | nucleus | 50.22 | 30.18 |
| GSMUA_Achr7P23980_001 | Banana | mitochondrion | 22.27 | 30.18 |
| GSMUA_Achr4P23360_001 | Banana | nucleus | 34.06 | 29.77 |
| GSMUA_Achr4P08880_001 | Banana | nucleus | 20.96 | 29.09 |
| TraesCS3A01G242500.1 | Wheat | nucleus | 45.85 | 28.77 |
| TraesCS3D01G242500.1 | Wheat | nucleus | 45.85 | 28.69 |
| HORVU3Hr1G060500.1 | Barley | nucleus | 45.41 | 28.57 |
| TraesCS3B01G270500.1 | Wheat | nucleus | 45.85 | 28.53 |
| EES03393 | Sorghum | nucleus | 50.66 | 28.29 |
| GSMUA_Achr8P26240_001 | Banana | nucleus | 20.52 | 27.33 |
| GSMUA_Achr8P10740_001 | Banana | nucleus | 36.68 | 26.84 |
| GSMUA_Achr7P13310_001 | Banana | nucleus | 27.51 | 26.47 |
| Zm00001d011527_P001 | Maize | nucleus | 47.6 | 26.33 |
| Zm00001d039032_P001 | Maize | nucleus | 46.29 | 25.98 |
| TraesCS1A01G401800.1 | Wheat | nucleus | 43.67 | 25.13 |
| Os05t0565900-00 | Rice | nucleus | 45.41 | 24.82 |
| GSMUA_Achr7P09680_001 | Banana | nucleus | 21.83 | 24.75 |
| GSMUA_Achr6P22920_001 | Banana | mitochondrion | 24.45 | 24.67 |
| EES18690 | Sorghum | nucleus | 45.41 | 24.53 |
| GSMUA_Achr4P07920_001 | Banana | nucleus | 46.72 | 21.97 |
| GSMUA_Achr10P... | Banana | nucleus | 25.33 | 21.09 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr3G31310_001 | EnsemblPlants:GSMUA_Achr3P31310_001 | EnsemblPlants:GSMUA_Achr3T31310_001 | InterPro:IPR003657 | InterPro:IPR036576 |
| UniProt:M0SJE5 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF56 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI000294D2F9 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
WRKY transcription factor, putative [Source:GMGC_GENE;Acc:GSMUA_Achr3G31310_001]
Coordinates
chr3:-:29670633..29673936
Molecular Weight (calculated)
25720.3 Da
IEP (calculated)
10.078
GRAVY (calculated)
-0.955
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRCVGNLLQ DSIMKFLTST SWCGGGTTPV TPNSSASSSS TEAAGEEGGA RRKKDQLKRE EDGDDMSNKV RKKPKKERRQ REPRFAFVTR SEVDHLDDGY
101: RWRKYGQKAV KNSPYPRSYY RCTTPKCPVK KRVERSYEDP TIVVTTYEGK HTHQSPHTVR ANTHQLAHPL PMMSTSFSQL PQLGCTTQQG NINPNAFPSN
201: LSSALQPSRF PDCGLLQDIL SSFLHGSQP
101: RWRKYGQKAV KNSPYPRSYY RCTTPKCPVK KRVERSYEDP TIVVTTYEGK HTHQSPHTVR ANTHQLAHPL PMMSTSFSQL PQLGCTTQQG NINPNAFPSN
201: LSSALQPSRF PDCGLLQDIL SSFLHGSQP
001: MSNETRDLYN YQYPSSFSLH EMMNLPTSNP SSYGNLPSQN GFNPSTYSFT DCLQSSPAAY ESLLQKTFGL SPSSSEVFNS SIDQEPNRDV TNDVINGGAC
101: NETETRVSPS NSSSSEADHP GEDSGKSRRK RELVGEEDQI SKKVGKTKKT EVKKQREPRV SFMTKSEVDH LEDGYRWRKY GQKAVKNSPY PRSYYRCTTQ
201: KCNVKKRVER SFQDPTVVIT TYEGQHNHPI PTNLRGSSAA AAMFSADLMT PRSFAHDMFR TAAYTNGGSV AAALDYGYGQ SGYGSVNSNP SSHQVYHQGG
301: EYELLREIFP SIFFKQEP
101: NETETRVSPS NSSSSEADHP GEDSGKSRRK RELVGEEDQI SKKVGKTKKT EVKKQREPRV SFMTKSEVDH LEDGYRWRKY GQKAVKNSPY PRSYYRCTTQ
201: KCNVKKRVER SFQDPTVVIT TYEGQHNHPI PTNLRGSSAA AAMFSADLMT PRSFAHDMFR TAAYTNGGSV AAALDYGYGQ SGYGSVNSNP SSHQVYHQGG
301: EYELLREIFP SIFFKQEP
Arabidopsis Description
WRKY28WRKY28 [Source:UniProtKB/TrEMBL;Acc:A0A178V3M3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.