Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G242500.1 | Wheat | nucleus | 96.71 | 96.45 |
| TraesCS3B01G270500.1 | Wheat | nucleus | 95.07 | 94.29 |
| HORVU3Hr1G060500.1 | Barley | nucleus | 91.51 | 91.76 |
| Zm00001d043950_P001 | Maize | nucleus | 61.64 | 59.06 |
| EES03393 | Sorghum | nucleus | 64.66 | 57.56 |
| Zm00001d011527_P001 | Maize | nucleus | 60.82 | 53.62 |
| GSMUA_Achr3P31310_001 | Banana | nucleus | 28.77 | 45.85 |
| TraesCS1A01G401800.1 | Wheat | nucleus | 49.04 | 44.97 |
| TraesCS1A01G348600.1 | Wheat | plastid | 16.44 | 44.44 |
| GSMUA_Achr1P04770_001 | Banana | nucleus | 29.86 | 36.82 |
| GSMUA_Achr6P22160_001 | Banana | nucleus | 35.07 | 36.47 |
| TraesCS2A01G261900.1 | Wheat | nucleus | 27.67 | 35.31 |
| GSMUA_Achr7P25400_001 | Banana | nucleus | 31.51 | 35.28 |
| PGSC0003DMT400025113 | Potato | nucleus | 30.41 | 34.91 |
| TraesCS2A01G011000.1 | Wheat | nucleus | 19.45 | 34.63 |
| Solyc02g071130.2.1 | Tomato | nucleus | 29.86 | 34.38 |
| TraesCS3A01G228600.1 | Wheat | nucleus | 32.05 | 33.91 |
| TraesCS5A01G395100.1 | Wheat | nucleus | 28.77 | 33.87 |
| TraesCS1A01G421800.1 | Wheat | nucleus | 26.3 | 33.57 |
| GSMUA_Achr4P14990_001 | Banana | nucleus | 30.41 | 33.43 |
| GSMUA_Achr4P02800_001 | Banana | nucleus | 29.86 | 33.13 |
| TraesCS1A01G421900.1 | Wheat | nucleus | 18.36 | 32.21 |
| TraesCS3A01G280400.1 | Wheat | nucleus | 18.36 | 30.18 |
| TraesCS2A01G392100.1 | Wheat | nucleus | 18.36 | 29.26 |
| TraesCS6A01G242000.1 | Wheat | nucleus | 18.08 | 27.97 |
| TraesCS1A01G358400.1 | Wheat | plastid | 16.71 | 27.73 |
| TraesCS3A01G248700.1 | Wheat | plastid | 15.34 | 27.59 |
| TraesCS1A01G358100.1 | Wheat | nucleus, plastid | 16.16 | 26.82 |
| TraesCS3A01G209800.1 | Wheat | nucleus | 16.16 | 25.88 |
| TraesCS3A01G116200.1 | Wheat | plastid | 18.36 | 25.57 |
| TraesCS1A01G121500.1 | Wheat | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 13.7 | 25.51 |
| TraesCS3A01G111200.1 | Wheat | nucleus | 15.62 | 25.33 |
| GSMUA_Achr4P07920_001 | Banana | nucleus | 33.42 | 25.05 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31221 | PANTHER:PTHR31221:SF79 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS3A01G242500 | EnsemblPlants:TraesCS3A01G242500.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3A:-:455802949..455805229
Molecular Weight (calculated)
38652.5 Da
IEP (calculated)
8.696
GRAVY (calculated)
-0.624
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGEFQFHDE LASLFMQRPG PGMQQQEQQA SWLADYLQTP MDYDLLCRAL ELPAAEDVVK RELVVDTTPS GGALTPSAGG GTPNATSSMS SSSSEAGGGL
101: CAGEGDSAGR CKKEDGDGED GKGGDEGDKS KKGSAAVAAK GGKAAKGEKR PRQPRFAFMT KSEVDHLEDG YRWRKYGQKA VKNSPYPRSY YRCTTQKCVV
201: KKRVERSFQD PAVVITTYEG KHTHPIPSAL RGSTHLLAAQ AAHLHHQHHG HLGMMPQMGM GGRAGSPFGR SSGVDVLGGL LQPRAHHSMT RPMIGSGAGH
301: QASTQGLAGS ISSVASPTAS SPPSLQMQHF MAPDFGLLQD MLPSFIHGAG GNNNNQPSSP YGKLH
101: CAGEGDSAGR CKKEDGDGED GKGGDEGDKS KKGSAAVAAK GGKAAKGEKR PRQPRFAFMT KSEVDHLEDG YRWRKYGQKA VKNSPYPRSY YRCTTQKCVV
201: KKRVERSFQD PAVVITTYEG KHTHPIPSAL RGSTHLLAAQ AAHLHHQHHG HLGMMPQMGM GGRAGSPFGR SSGVDVLGGL LQPRAHHSMT RPMIGSGAGH
301: QASTQGLAGS ISSVASPTAS SPPSLQMQHF MAPDFGLLQD MLPSFIHGAG GNNNNQPSSP YGKLH
001: MSNETRDLYN YQYPSSFSLH EMMNLPTSNP SSYGNLPSQN GFNPSTYSFT DCLQSSPAAY ESLLQKTFGL SPSSSEVFNS SIDQEPNRDV TNDVINGGAC
101: NETETRVSPS NSSSSEADHP GEDSGKSRRK RELVGEEDQI SKKVGKTKKT EVKKQREPRV SFMTKSEVDH LEDGYRWRKY GQKAVKNSPY PRSYYRCTTQ
201: KCNVKKRVER SFQDPTVVIT TYEGQHNHPI PTNLRGSSAA AAMFSADLMT PRSFAHDMFR TAAYTNGGSV AAALDYGYGQ SGYGSVNSNP SSHQVYHQGG
301: EYELLREIFP SIFFKQEP
101: NETETRVSPS NSSSSEADHP GEDSGKSRRK RELVGEEDQI SKKVGKTKKT EVKKQREPRV SFMTKSEVDH LEDGYRWRKY GQKAVKNSPY PRSYYRCTTQ
201: KCNVKKRVER SFQDPTVVIT TYEGQHNHPI PTNLRGSSAA AAMFSADLMT PRSFAHDMFR TAAYTNGGSV AAALDYGYGQ SGYGSVNSNP SSHQVYHQGG
301: EYELLREIFP SIFFKQEP
Arabidopsis Description
WRKY28WRKY28 [Source:UniProtKB/TrEMBL;Acc:A0A178V3M3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.