Factsheet for TraesCS2A01G011000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G010500.1	Wheat	nucleus	96.1	96.1
HORVU2Hr1G001780.1	Barley	nucleus	90.73	94.9
TraesCS2D01G011700.1	Wheat	nucleus	94.63	94.17
Os11t0490900-01	Rice	nucleus	73.17	61.98
Solyc02g094270.1.1	Tomato	nucleus	39.02	61.07
GSMUA_Achr9P29350_001	Banana	nucleus	47.32	61.01
Zm00001d007329_P001	Maize	nucleus	65.37	60.91
Zm00001d049173_P001	Maize	nucleus	67.8	60.7
PGSC0003DMT400052057	Potato	nucleus	41.46	60.28
EES08501	Sorghum	nucleus	65.37	59.56
GSMUA_Achr9P01400_001	Banana	nucleus	52.2	59.12
VIT_17s0000g01280.t01	Wine grape	nucleus	43.41	58.94
GSMUA_AchrUn_...	Banana	nucleus	49.27	57.06
GSMUA_Achr6P06360_001	Banana	nucleus	47.8	53.26
TraesCS1A01G348600.1	Wheat	plastid	33.66	51.11
KRH41119	Soybean	nucleus	36.59	51.02
KRH54160	Soybean	nucleus	34.15	43.75
TraesCS3A01G280400.1	Wheat	nucleus	35.61	32.88
TraesCS2A01G392100.1	Wheat	nucleus	32.2	28.82
TraesCS6A01G242000.1	Wheat	nucleus	31.71	27.54
TraesCS1A01G121500.1	Wheat	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	24.88	26.02
TraesCS1A01G358400.1	Wheat	plastid	26.83	25.0
TraesCS1A01G358100.1	Wheat	nucleus, plastid	25.85	24.09
TraesCS3A01G248700.1	Wheat	plastid	23.41	23.65
TraesCS1A01G421800.1	Wheat	nucleus	31.22	22.38
TraesCS3A01G209800.1	Wheat	nucleus	24.88	22.37
TraesCS3A01G116200.1	Wheat	plastid	28.29	22.14
TraesCS3A01G111200.1	Wheat	nucleus	22.93	20.89
TraesCS2A01G261900.1	Wheat	nucleus	28.29	20.28
TraesCS5A01G395100.1	Wheat	nucleus	29.76	19.68
TraesCS3A01G242500.1	Wheat	nucleus	34.63	19.45
TraesCS1A01G421900.1	Wheat	nucleus	19.02	18.75
TraesCS3A01G228600.1	Wheat	nucleus	30.24	17.97
TraesCS1A01G401800.1	Wheat	nucleus	33.17	17.09

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR31221	PANTHER:PTHR31221:SF25	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:TraesCS2A01G011000	EnsemblPlants:TraesCS2A01G011000.1
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2A:+:4161142..4165096

Molecular Weight (calculated)

22671.0 Da

IEP (calculated)

9.007

GRAVY (calculated)

-1.047

Length

205 amino acids

Sequence
(BLAST)

001: MENYPILFGT QPSSSTSNSY HFMAGASSHD HLHHHGQAAG NNTGGGGGLG QGLFSGSKQE DPSESKDGGD DRAGSSSQGG GEADVVVGKK KGEKRERRPR
101: FAFQTRSQVD ILDDGYRWRK YGQKAVKNNN FPRSYYRCTH QGCNVKKQVQ RLSRDEGVVV TTYEGTHTHP IEKSNDNFEH ILTQMQVYSG INNVSQTFGN
201: QHMFQ

Best Arabidopsis Sequence Match ( AT5G13080.1 )
(BLAST)

001: MEGYDNGSLY APFLSLKSHS KPELHQGEEE SSKVRSEGCS KSVESSKKKG KKQRYAFQTR SQVDILDDGY RWRKYGQKAV KNNKFPRSYY RCTYGGCNVK
101: KQVQRLTVDQ EVVVTTYEGV HSHPIEKSTE NFEHILTQMQ IYSSF

Arabidopsis Description

WRKY75WRKY75 [Source:UniProtKB/TrEMBL;Acc:A0A178UJF4]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.