Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G280200.1 | Wheat | nucleus | 96.4 | 96.4 |
| HORVU3Hr1G069660.1 | Barley | nucleus | 90.54 | 87.01 |
| TraesCS1A01G348600.1 | Wheat | plastid | 41.89 | 68.89 |
| AT2G46130.1 | Thale cress | nucleus | 33.78 | 68.81 |
| Zm00001d012789_P001 | Maize | nucleus | 58.11 | 56.83 |
| Os01t0734000-01 | Rice | nucleus | 63.96 | 55.91 |
| VIT_15s0046g02150.t01 | Wine grape | nucleus, plastid | 48.65 | 53.73 |
| GSMUA_Achr7P24780_001 | Banana | nucleus | 43.24 | 53.33 |
| EES01425 | Sorghum | nucleus | 58.56 | 52.85 |
| KRH40372 | Soybean | cytosol | 45.05 | 52.08 |
| KRH00862 | Soybean | cytosol | 45.05 | 52.08 |
| KRH06569 | Soybean | nucleus | 44.59 | 50.77 |
| AT5G41570.1 | Thale cress | nucleus | 37.84 | 46.93 |
| CDY44466 | Canola | nucleus | 36.94 | 46.59 |
| Bra025490.1-P | Field mustard | nucleus | 36.49 | 46.55 |
| CDY39732 | Canola | nucleus | 36.49 | 46.02 |
| CDY25554 | Canola | nucleus | 36.49 | 43.09 |
| PGSC0003DMT400032090 | Potato | nucleus | 44.14 | 42.98 |
| Bra027675.1-P | Field mustard | nucleus | 36.49 | 42.86 |
| Solyc08g081630.1.1 | Tomato | nucleus | 44.59 | 42.86 |
| CDY34393 | Canola | nucleus | 36.49 | 42.63 |
| CDY38208 | Canola | nucleus | 35.59 | 42.47 |
| Bra027768.1-P | Field mustard | nucleus | 35.59 | 42.25 |
| AT1G64000.1 | Thale cress | nucleus | 36.94 | 42.05 |
| CDY55479 | Canola | nucleus | 34.68 | 41.4 |
| TraesCS2A01G011000.1 | Wheat | nucleus | 32.88 | 35.61 |
| TraesCS1A01G121500.1 | Wheat | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 24.32 | 27.55 |
| TraesCS2A01G392100.1 | Wheat | nucleus | 27.48 | 26.64 |
| TraesCS3A01G248700.1 | Wheat | plastid | 24.32 | 26.6 |
| TraesCS1A01G358400.1 | Wheat | plastid | 25.68 | 25.91 |
| TraesCS6A01G242000.1 | Wheat | nucleus | 27.03 | 25.42 |
| TraesCS1A01G358100.1 | Wheat | nucleus, plastid | 24.32 | 24.55 |
| TraesCS3A01G209800.1 | Wheat | nucleus | 24.77 | 24.12 |
| TraesCS3A01G111200.1 | Wheat | nucleus | 24.32 | 24.0 |
| TraesCS1A01G421800.1 | Wheat | nucleus | 30.63 | 23.78 |
| TraesCS2A01G261900.1 | Wheat | nucleus | 28.38 | 22.03 |
| TraesCS3A01G116200.1 | Wheat | plastid | 24.32 | 20.61 |
| TraesCS1A01G421900.1 | Wheat | nucleus | 18.92 | 20.19 |
| TraesCS5A01G395100.1 | Wheat | nucleus | 26.58 | 19.03 |
| TraesCS3A01G228600.1 | Wheat | nucleus | 28.83 | 18.55 |
| TraesCS3A01G242500.1 | Wheat | nucleus | 30.18 | 18.36 |
| TraesCS1A01G401800.1 | Wheat | nucleus | 28.83 | 16.08 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31221 | PANTHER:PTHR31221:SF7 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS3A01G280400 | EnsemblPlants:TraesCS3A01G280400.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3A:-:509533669..509536776
Molecular Weight (calculated)
24093.1 Da
IEP (calculated)
7.112
GRAVY (calculated)
-0.753
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGLHGDDEA HTFPPFPYFS APSTPPPLAS PLASSSDGQH SPLAAALQQL TPPPWPCTPP DLTLQPAMGD VNWSSLFQTG PVALPEQEEE AVQADQSGEN
101: DGEAGGSGSG NKEKAKGSAG RSGKKKASKP RFAFQTRSEN DILDDGYRWR KYGQKAVKNS SNPRSYYRCT HPTCNVKKQV QRLAKDTAIV VTTYEGVHNH
201: PCEKLMEALG PILKQLQFLS QF
101: DGEAGGSGSG NKEKAKGSAG RSGKKKASKP RFAFQTRSEN DILDDGYRWR KYGQKAVKNS SNPRSYYRCT HPTCNVKKQV QRLAKDTAIV VTTYEGVHNH
201: PCEKLMEALG PILKQLQFLS QF
001: MDREDINPML SRLDVENNNT FSSFVDKTLM MMPPSTFSGE VEPSSSSSWY PESFHVHAPP LPPENDQIGE KGKELKEKRS RKVPRIAFHT RSDDDVLDDG
101: YRWRKYGQKS VKHNAHPRSY YRCTYHTCNV KKQVQRLAKD PNVVVTTYEG VHNHPCEKLM ETLNPLLRQL QFLSSFSNL
101: YRWRKYGQKS VKHNAHPRSY YRCTYHTCNV KKQVQRLAKD PNVVVTTYEG VHNHPCEKLM ETLNPLLRQL QFLSSFSNL
Arabidopsis Description
WRKY24Probable WRKY transcription factor 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFS3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.