Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G429900.1 | Wheat | nucleus | 85.58 | 57.98 |
| TraesCS1B01G453300.1 | Wheat | nucleus | 82.69 | 55.13 |
| TraesCS1D01G429800.1 | Wheat | nucleus | 68.75 | 49.65 |
| HORVU1Hr1G092130.1 | Barley | nucleus | 73.56 | 49.51 |
| TraesCS1A01G421800.1 | Wheat | nucleus | 64.9 | 47.2 |
| TraesCS1A01G348600.1 | Wheat | plastid | 18.75 | 28.89 |
| Os05t0583000-01 | Rice | nucleus | 45.19 | 27.89 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.06 | 26.04 |
| OQU78504 | Sorghum | nucleus | 32.21 | 25.57 |
| TraesCS3A01G228600.1 | Wheat | nucleus | 41.35 | 24.93 |
| VIT_10s0003g02810.t01 | Wine grape | nucleus | 33.17 | 21.63 |
| Bra030178.1-P | Field mustard | nucleus | 27.4 | 20.58 |
| CDY43194 | Canola | nucleus | 26.92 | 20.22 |
| CDX98155 | Canola | nucleus | 27.4 | 20.07 |
| AT1G29860.1 | Thale cress | nucleus | 26.92 | 19.86 |
| VIT_12s0028g00270.t01 | Wine grape | nucleus | 29.33 | 19.61 |
| KRH58435 | Soybean | nucleus | 33.65 | 19.55 |
| Bra012614.1-P | Field mustard | nucleus | 29.33 | 19.55 |
| CDX90417 | Canola | nucleus | 29.33 | 19.49 |
| CDY09083 | Canola | nucleus | 29.33 | 19.49 |
| Bra040926.1-P | Field mustard | nucleus | 27.4 | 19.39 |
| CDX76541 | Canola | nucleus | 27.4 | 19.39 |
| TraesCS2A01G392100.1 | Wheat | nucleus | 21.15 | 19.21 |
| CDX99859 | Canola | nucleus | 25.0 | 19.05 |
| CDY08894 | Canola | nucleus | 26.92 | 19.05 |
| CDY26310 | Canola | nucleus | 25.0 | 19.05 |
| Bra032340.1-P | Field mustard | nucleus | 25.0 | 19.05 |
| TraesCS2A01G011000.1 | Wheat | nucleus | 18.75 | 19.02 |
| TraesCS3A01G280400.1 | Wheat | nucleus | 20.19 | 18.92 |
| CDX99495 | Canola | nucleus | 28.37 | 18.91 |
| CDY01523 | Canola | nucleus | 28.37 | 18.91 |
| TraesCS5A01G395100.1 | Wheat | nucleus | 27.88 | 18.71 |
| KRH73639 | Soybean | nucleus | 30.29 | 18.69 |
| KRH42308 | Soybean | nucleus | 33.17 | 18.6 |
| AT4G18170.1 | Thale cress | nucleus | 28.37 | 18.55 |
| Bra013289.1-P | Field mustard | nucleus | 27.4 | 18.51 |
| CDX78832 | Canola | nucleus | 27.4 | 18.51 |
| TraesCS3A01G242500.1 | Wheat | nucleus | 32.21 | 18.36 |
| KRH14487 | Soybean | nucleus | 29.33 | 18.21 |
| TraesCS6A01G242000.1 | Wheat | nucleus | 20.19 | 17.8 |
| CDY35159 | Canola | nucleus | 27.4 | 17.76 |
| CDY03224 | Canola | nucleus | 27.4 | 17.76 |
| TraesCS1A01G358400.1 | Wheat | plastid | 18.75 | 17.73 |
| TraesCS2A01G261900.1 | Wheat | nucleus | 24.04 | 17.48 |
| Bra017561.1-P | Field mustard | nucleus | 26.92 | 17.45 |
| TraesCS1A01G401800.1 | Wheat | nucleus | 33.17 | 17.34 |
| Bra022033.1-P | Field mustard | nucleus | 25.96 | 17.03 |
| CDY43969 | Canola | nucleus | 25.96 | 17.03 |
| CDX77655 | Canola | nucleus | 26.44 | 17.03 |
| AT5G46350.1 | Thale cress | nucleus | 26.44 | 16.87 |
| CDY33471 | Canola | nucleus | 25.96 | 16.72 |
| Bra025021.1-P | Field mustard | nucleus | 25.96 | 16.72 |
| TraesCS1A01G358100.1 | Wheat | nucleus, plastid | 17.31 | 16.36 |
| TraesCS3A01G248700.1 | Wheat | plastid | 15.87 | 16.26 |
| TraesCS3A01G116200.1 | Wheat | plastid | 19.71 | 15.65 |
| TraesCS3A01G111200.1 | Wheat | nucleus | 16.83 | 15.56 |
| TraesCS1A01G121500.1 | Wheat | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 13.94 | 14.8 |
| TraesCS3A01G209800.1 | Wheat | nucleus | 15.87 | 14.47 |
| CDX87722 | Canola | nucleus | 19.23 | 12.78 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31221 | PANTHER:PTHR31221:SF52 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS1A01G421900 | EnsemblPlants:TraesCS1A01G421900.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr1A:-:577820458..577821778
Molecular Weight (calculated)
22516.0 Da
IEP (calculated)
6.791
GRAVY (calculated)
-0.810
Length
208 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGSAAAGGE DLGGGQFYGD HPPADDGFFQ SRSACGGEGD GGVTPSVYSS ITDYLQGLLD PAELARHLDA PPCYPAMRDV IGETATPVTP NSSTSGEAAG
101: AESHGCKRGS PVPEEGDEDG SADHHNHRSD EKEQKKKRKG EKKARGSRVA FATKSEVDHL DDGYRWRKYG QKAVKNSSFP RYYLLTFTPM RMCFEKKKHA
201: FHFSVLLL
101: AESHGCKRGS PVPEEGDEDG SADHHNHRSD EKEQKKKRKG EKKARGSRVA FATKSEVDHL DDGYRWRKYG QKAVKNSSFP RYYLLTFTPM RMCFEKKKHA
201: FHFSVLLL
001: MEFTDFSKTS FYYPSSQSVW DFGDLAAAER HSLGFMELLS SQQHQDFATV SPHSFLLQTS QPQTQTQPSA KLSSSIIQAP PSEQLVTSKV ESLCSDHLLI
101: NPPATPNSSS ISSASSEALN EEKPKTEDNE EEGGEDQQEK SHTKKQLKAK KNNQKRQREA RVAFMTKSEV DHLEDGYRWR KYGQKAVKNS PFPRSYYRCT
201: TASCNVKKRV ERSFRDPSTV VTTYEGQHTH ISPLTSRPIS TGGFFGSSGA ASSLGNGCFG FPIDGSTLIS PQFQQLVQYH HQQQQQELMS CFGGVNEYLN
301: SHANEYGDDN RVKKSRVLVK DNGLLQDVVP SHMLKEE
101: NPPATPNSSS ISSASSEALN EEKPKTEDNE EEGGEDQQEK SHTKKQLKAK KNNQKRQREA RVAFMTKSEV DHLEDGYRWR KYGQKAVKNS PFPRSYYRCT
201: TASCNVKKRV ERSFRDPSTV VTTYEGQHTH ISPLTSRPIS TGGFFGSSGA ASSLGNGCFG FPIDGSTLIS PQFQQLVQYH HQQQQQELMS CFGGVNEYLN
301: SHANEYGDDN RVKKSRVLVK DNGLLQDVVP SHMLKEE
Arabidopsis Description
WRKY23Probable WRKY transcription factor 23 [Source:UniProtKB/Swiss-Prot;Acc:O22900]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.