Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017561.1-P | Field mustard | nucleus | 99.07 | 99.07 |
| CDY03224 | Canola | nucleus | 98.44 | 98.44 |
| CDX77655 | Canola | nucleus | 83.8 | 83.28 |
| CDY33471 | Canola | nucleus | 83.18 | 82.66 |
| CDY43969 | Canola | nucleus | 80.06 | 81.07 |
| AT5G46350.1 | Thale cress | nucleus | 79.44 | 78.22 |
| CDX76541 | Canola | nucleus | 56.07 | 61.22 |
| CDY08894 | Canola | nucleus | 55.76 | 60.88 |
| CDY09083 | Canola | nucleus | 57.32 | 58.79 |
| CDX90417 | Canola | nucleus | 57.32 | 58.79 |
| CDY01523 | Canola | nucleus | 56.7 | 58.33 |
| CDX78832 | Canola | nucleus | 54.83 | 57.14 |
| CDX99495 | Canola | nucleus | 54.83 | 56.41 |
| CDY72079 | Canola | nucleus | 18.38 | 53.15 |
| CDX87722 | Canola | nucleus | 49.22 | 50.48 |
| VIT_10s0003g02810.t01 | Wine grape | nucleus | 40.5 | 40.75 |
| CDY43194 | Canola | nucleus | 34.89 | 40.43 |
| CDX98155 | Canola | nucleus | 34.58 | 39.08 |
| CDX77096 | Canola | nucleus | 17.45 | 38.89 |
| CDX99859 | Canola | nucleus | 32.71 | 38.46 |
| CDY26310 | Canola | nucleus | 32.4 | 38.1 |
| KRH58435 | Soybean | nucleus | 40.81 | 36.59 |
| KRH42308 | Soybean | nucleus | 40.5 | 35.04 |
| CDX78504 | Canola | nucleus | 15.89 | 34.69 |
| CDX70492 | Canola | nucleus | 15.89 | 34.69 |
| CDX97223 | Canola | nucleus | 15.58 | 34.01 |
| CDX69672 | Canola | nucleus | 15.58 | 34.01 |
| CDY48151 | Canola | nucleus | 17.76 | 33.33 |
| CDX83415 | Canola | nucleus, plastid | 19.31 | 32.98 |
| CDX95615 | Canola | nucleus, plastid | 19.31 | 32.63 |
| GSMUA_Achr6P27090_001 | Banana | nucleus | 30.22 | 32.33 |
| CDX87064 | Canola | nucleus | 17.13 | 32.16 |
| CDY05537 | Canola | nucleus | 16.82 | 32.14 |
| CDY24990 | Canola | nucleus | 16.82 | 31.95 |
| OQU78504 | Sorghum | nucleus | 25.86 | 31.68 |
| GSMUA_Achr9P06750_001 | Banana | nucleus | 28.35 | 30.85 |
| CDY37794 | Canola | nucleus | 29.28 | 30.03 |
| CDY52627 | Canola | nucleus | 16.2 | 29.55 |
| CDX88219 | Canola | nucleus | 16.2 | 29.55 |
| CDY30483 | Canola | nucleus | 20.25 | 29.55 |
| GSMUA_AchrUn_... | Banana | nucleus | 26.48 | 29.51 |
| CDX80094 | Canola | nucleus | 28.97 | 29.43 |
| CDY23453 | Canola | nucleus | 19.94 | 29.36 |
| TraesCS1D01G430000.1 | Wheat | nucleus | 26.79 | 29.05 |
| CDY51420 | Canola | nucleus | 29.28 | 29.01 |
| CDY44466 | Canola | nucleus | 15.89 | 28.98 |
| CDY71963 | Canola | nucleus | 19.31 | 28.97 |
| CDY48258 | Canola | nucleus | 19.31 | 28.84 |
| CDY39732 | Canola | nucleus | 15.58 | 28.41 |
| CDY27500 | Canola | nucleus | 28.97 | 27.93 |
| CDX95947 | Canola | nucleus | 25.55 | 27.89 |
| TraesCS1D01G429800.1 | Wheat | nucleus | 24.92 | 27.78 |
| TraesCS1A01G421800.1 | Wheat | nucleus | 24.61 | 27.62 |
| CDY40910 | Canola | nucleus | 25.23 | 27.55 |
| TraesCS1A01G421900.1 | Wheat | nucleus | 17.76 | 27.4 |
| CDY54139 | Canola | nucleus | 25.23 | 27.18 |
| TraesCS1B01G453200.1 | Wheat | nucleus | 24.3 | 27.18 |
| CDY11416 | Canola | nucleus | 24.92 | 26.85 |
| CDY04276 | Canola | nucleus | 23.99 | 26.83 |
| TraesCS1D01G429900.1 | Wheat | nucleus | 25.55 | 26.71 |
| CDY07352 | Canola | nucleus | 23.99 | 26.64 |
| CDX76630 | Canola | nucleus | 24.61 | 26.6 |
| CDY38208 | Canola | nucleus | 15.26 | 26.34 |
| CDY34393 | Canola | nucleus | 15.58 | 26.32 |
| HORVU1Hr1G092130.1 | Barley | nucleus | 25.23 | 26.21 |
| CDY25554 | Canola | nucleus | 15.26 | 26.06 |
| CDY18694 | Canola | nucleus | 14.02 | 26.01 |
| TraesCS1B01G453300.1 | Wheat | nucleus | 25.23 | 25.96 |
| CDY55479 | Canola | nucleus | 14.95 | 25.81 |
| CDY72613 | Canola | nucleus | 25.86 | 25.7 |
| CDY50313 | Canola | nucleus | 24.3 | 25.24 |
| Os05t0583000-01 | Rice | nucleus | 26.48 | 25.22 |
| CDY05620 | Canola | nucleus | 29.91 | 24.55 |
| CDY41978 | Canola | nucleus | 22.43 | 24.16 |
| CDY53184 | Canola | nucleus | 21.81 | 23.89 |
| CDX72701 | Canola | nucleus | 20.87 | 23.76 |
| CDX81259 | Canola | nucleus | 14.64 | 23.62 |
| CDY12144 | Canola | nucleus | 21.5 | 23.39 |
| CDX85413 | Canola | nucleus | 28.97 | 23.31 |
| CDY08849 | Canola | nucleus | 14.33 | 22.33 |
| CDY14512 | Canola | nucleus | 14.33 | 22.33 |
| CDY31301 | Canola | nucleus | 12.77 | 20.81 |
| CDY46824 | Canola | nucleus | 13.08 | 14.48 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078HCF4 | UniProt:A0A078HCF4 | unigene:Bna.29291 | EnsemblPlants:CDY35159 |
| ProteinID:CDY35159 | ProteinID:CDY35159.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00058049001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PIRSF:PIRSF038130 |
| PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF56 | SMART:SM00774 | SUPFAM:SSF118290 | InterPro:TF_WRKY_IIc |
| UniParc:UPI0004EEF8F7 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : |
Description
BnaA09g17960DBnaA09g17960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HCF4]
Coordinates
chrLK032347:-:146462..150388
Molecular Weight (calculated)
36418.6 Da
IEP (calculated)
8.014
GRAVY (calculated)
-1.072
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNETKDLNN YHYTSSYNHY NNINSQNMSL PYVSGPCTYN ANMISSQIGS DLHSSSQGAF GFCFEPSPSS SEFFNPSIDQ ENGFYNAYNY NTSLKSHEVV
101: GGGGAIAENE TRVSASPSSG EADHHHGENS GKSLLKREAD DGGDKQRSQK VVKTKKNQEK KIREPRVSFM TKTEVDHLED GYRWRKYGQK AVKNSPYPRS
201: YYRCTTQKCN VKKRVERSYQ DPTVVITTYE SQHDHPIPTT RRTAMFSGPA ASDYKSSSLS PGSNFINTPR SFSHDDLFRV PYSSMNVNPN YQQQQNHEFQ
301: HGSDYELLKE MFPSGFFKQE P
101: GGGGAIAENE TRVSASPSSG EADHHHGENS GKSLLKREAD DGGDKQRSQK VVKTKKNQEK KIREPRVSFM TKTEVDHLED GYRWRKYGQK AVKNSPYPRS
201: YYRCTTQKCN VKKRVERSYQ DPTVVITTYE SQHDHPIPTT RRTAMFSGPA ASDYKSSSLS PGSNFINTPR SFSHDDLFRV PYSSMNVNPN YQQQQNHEFQ
301: HGSDYELLKE MFPSGFFKQE P
001: MSHEIKDLNN YHYTSSYNHY NINNQNMINL PYVSGPSAYN ANMISSSQVG FDLPSKNLSP QGAFELGFEL SPSSSDFFNP SLDQENGLYN AYNYNSSQKS
101: HEVVGDGCAT IKSEVRVSAS PSSSEADHHP GEDSGKIRKK REVRDGGEDD QRSQKVVKTK KKEEKKKEPR VSFMTKTEVD HLEDGYRWRK YGQKAVKNSP
201: YPRSYYRCTT QKCNVKKRVE RSYQDPTVVI TTYESQHNHP IPTNRRTAMF SGTTASDYNP SSSPIFSDLI INTPRSFSND DLFRVPYASV NVNPSYHQQQ
301: HGFHQQESEF ELLKEMFPSV FFKQEP
101: HEVVGDGCAT IKSEVRVSAS PSSSEADHHP GEDSGKIRKK REVRDGGEDD QRSQKVVKTK KKEEKKKEPR VSFMTKTEVD HLEDGYRWRK YGQKAVKNSP
201: YPRSYYRCTT QKCNVKKRVE RSYQDPTVVI TTYESQHNHP IPTNRRTAMF SGTTASDYNP SSSPIFSDLI INTPRSFSND DLFRVPYASV NVNPSYHQQQ
301: HGFHQQESEF ELLKEMFPSV FFKQEP
Arabidopsis Description
WRKY8Probable WRKY transcription factor 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL26]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.