Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038313.1-P | Field mustard | nucleus | 96.98 | 96.66 |
| CDY50313 | Canola | nucleus | 96.98 | 93.53 |
| CDY04276 | Canola | nucleus | 77.52 | 80.49 |
| CDY07352 | Canola | nucleus | 77.85 | 80.28 |
| AT1G69310.2 | Thale cress | nucleus | 77.18 | 80.14 |
| CDY40910 | Canola | nucleus | 78.86 | 79.93 |
| CDX95947 | Canola | nucleus | 78.86 | 79.93 |
| CDY72079 | Canola | nucleus | 19.46 | 52.25 |
| KRH75010 | Soybean | nucleus | 51.01 | 51.18 |
| KRH70870 | Soybean | nucleus | 50.0 | 50.85 |
| VIT_01s0011g00720.t01 | Wine grape | nucleus | 50.34 | 49.18 |
| Os03t0758000-01 | Rice | nucleus, plastid | 32.21 | 41.56 |
| CDX77096 | Canola | nucleus | 19.46 | 40.28 |
| Os07t0111400-00 | Rice | nucleus | 38.93 | 40.0 |
| GSMUA_Achr4P23360_001 | Banana | nucleus | 34.56 | 39.31 |
| PGSC0003DMT400072958 | Potato | mitochondrion, nucleus | 42.28 | 38.65 |
| Solyc05g012500.2.1 | Tomato | nucleus | 41.95 | 38.23 |
| HORVU0Hr1G003340.1 | Barley | nucleus | 35.91 | 37.54 |
| CDX70492 | Canola | nucleus | 18.46 | 37.41 |
| CDX69672 | Canola | nucleus | 18.46 | 37.41 |
| CDX97223 | Canola | nucleus | 18.46 | 37.41 |
| CDX78504 | Canola | nucleus | 18.46 | 37.41 |
| TraesCS2B01G280300.1 | Wheat | nucleus | 35.57 | 37.19 |
| TraesCS5D01G404400.1 | Wheat | nucleus | 38.59 | 37.1 |
| TraesCS5B01G399900.1 | Wheat | nucleus | 38.59 | 36.98 |
| KXG34273 | Sorghum | mitochondrion | 33.56 | 36.76 |
| TraesCS5A01G395100.1 | Wheat | nucleus | 37.92 | 36.45 |
| TraesCS2A01G261900.1 | Wheat | nucleus | 34.9 | 36.36 |
| TraesCS2D01G262100.1 | Wheat | nucleus | 34.56 | 36.14 |
| EER90854 | Sorghum | nucleus | 39.6 | 35.65 |
| HORVU5Hr1G096420.20 | Barley | mitochondrion, nucleus | 34.23 | 33.77 |
| Zm00001d018656_P001 | Maize | nucleus | 37.58 | 33.73 |
| Zm00001d034073_P001 | Maize | nucleus | 37.25 | 33.53 |
| CDX83415 | Canola | nucleus, plastid | 21.14 | 33.51 |
| CDX95615 | Canola | nucleus, plastid | 21.14 | 33.16 |
| CDY05537 | Canola | nucleus | 18.12 | 32.14 |
| CDY24990 | Canola | nucleus | 18.12 | 31.95 |
| CDY44466 | Canola | nucleus | 18.79 | 31.82 |
| CDY39732 | Canola | nucleus | 18.79 | 31.82 |
| CDY48258 | Canola | nucleus | 22.48 | 31.16 |
| CDY43194 | Canola | nucleus | 28.86 | 31.05 |
| CDY71963 | Canola | nucleus | 22.15 | 30.84 |
| CDY26310 | Canola | nucleus | 28.19 | 30.77 |
| CDX98155 | Canola | nucleus | 29.19 | 30.63 |
| CDX87064 | Canola | nucleus | 17.45 | 30.41 |
| CDX99859 | Canola | nucleus | 27.85 | 30.4 |
| CDX76541 | Canola | nucleus | 29.87 | 30.27 |
| CDY52627 | Canola | nucleus | 17.79 | 30.11 |
| CDX88219 | Canola | nucleus | 17.79 | 30.11 |
| CDY72613 | Canola | nucleus | 32.55 | 30.03 |
| CDY48151 | Canola | nucleus | 17.11 | 29.82 |
| CDY08894 | Canola | nucleus | 29.19 | 29.59 |
| CDY23453 | Canola | nucleus | 21.48 | 29.36 |
| CDY30483 | Canola | nucleus | 21.48 | 29.09 |
| CDY37794 | Canola | nucleus | 29.87 | 28.43 |
| CDX80094 | Canola | nucleus | 29.87 | 28.16 |
| CDY51420 | Canola | nucleus | 30.54 | 28.09 |
| CDY55479 | Canola | nucleus | 17.45 | 27.96 |
| CDY34393 | Canola | nucleus | 17.79 | 27.89 |
| CDY01523 | Canola | nucleus | 29.19 | 27.88 |
| CDX90417 | Canola | nucleus | 29.19 | 27.8 |
| CDY09083 | Canola | nucleus | 29.19 | 27.8 |
| CDY25554 | Canola | nucleus | 17.45 | 27.66 |
| CDX78832 | Canola | nucleus | 28.52 | 27.6 |
| CDY38208 | Canola | nucleus | 17.11 | 27.42 |
| CDY27500 | Canola | nucleus | 30.54 | 27.33 |
| CDX99495 | Canola | nucleus | 28.52 | 27.24 |
| CDY18694 | Canola | nucleus | 15.77 | 27.17 |
| CDY05620 | Canola | nucleus | 35.57 | 27.11 |
| CDY11416 | Canola | nucleus | 26.85 | 26.85 |
| CDY43969 | Canola | nucleus | 28.19 | 26.5 |
| CDX85413 | Canola | nucleus | 35.23 | 26.32 |
| CDX76630 | Canola | nucleus | 26.17 | 26.26 |
| CDX77655 | Canola | nucleus | 28.19 | 26.01 |
| CDY33471 | Canola | nucleus | 28.19 | 26.01 |
| CDY03224 | Canola | nucleus | 27.52 | 25.55 |
| CDY08849 | Canola | nucleus | 17.45 | 25.24 |
| CDY14512 | Canola | nucleus | 17.45 | 25.24 |
| CDY35159 | Canola | nucleus | 27.18 | 25.23 |
| CDX81259 | Canola | nucleus | 16.78 | 25.13 |
| CDX87722 | Canola | nucleus | 24.5 | 23.32 |
| CDY53184 | Canola | nucleus | 22.82 | 23.21 |
| CDY31301 | Canola | nucleus | 15.1 | 22.84 |
| CDX72701 | Canola | nucleus | 21.48 | 22.7 |
| CDY12144 | Canola | nucleus | 22.15 | 22.37 |
| CDY41978 | Canola | nucleus | 21.81 | 21.81 |
| CDY46824 | Canola | nucleus | 15.1 | 15.52 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078IXR4 | UniProt:A0A078IXR4 | EnsemblPlants:CDY54139 | ProteinID:CDY54139 |
| ProteinID:CDY54139.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00013428001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF77 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EEA380 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaCnng26190DBnaCnng26190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IXR4]
Coordinates
chrLK033283:+:2253..5450
Molecular Weight (calculated)
32825.7 Da
IEP (calculated)
7.263
GRAVY (calculated)
-0.846
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDPENPDLT NHDSSWTQLT APDSHFFHRN TSDIFSDFVG NLHASSQSDH HHPHSLRFDT GLTPTSGVPS SVTTTTLPST PSSSSSPAAA LSVAVTEVST
101: STNLPATSSS SEDPTENSTA SAAKAPETPK KEKKKAQKRI RQPRFAFMTK SDVDNLEDGY RWRKYGQKAV KNSPFPRSYY RCTNSRCTVK KRVERSSEDP
201: SIVITTYEGQ HCHQTTGFPR GGILTAHDPS NFTSHHLLPP PLPDPYYYQE LLHQLHRDNT SSLRLPQSTT EGPAAVSSIN PPEEGLLGDI VPQTMRNT
101: STNLPATSSS SEDPTENSTA SAAKAPETPK KEKKKAQKRI RQPRFAFMTK SDVDNLEDGY RWRKYGQKAV KNSPFPRSYY RCTNSRCTVK KRVERSSEDP
201: SIVITTYEGQ HCHQTTGFPR GGILTAHDPS NFTSHHLLPP PLPDPYYYQE LLHQLHRDNT SSLRLPQSTT EGPAAVSSIN PPEEGLLGDI VPQTMRNT
001: MNDPDNPDLS NDDSAWRELT LTAQDSDFFD RDTSNILSDF GWNLHHSSDH PHSLRFDSDL TQTTGVKPTT VTSSCSSSAA VSVAVTSTNN NPSATSSSSE
101: DPAENSTASA EKTPPPETPV KEKKKAQKRI RQPRFAFMTK SDVDNLEDGY RWRKYGQKAV KNSPFPRSYY RCTNSRCTVK KRVERSSDDP SIVITTYEGQ
201: HCHQTIGFPR GGILTAHDPH SFTSHHHLPP PLPNPYYYQE LLHQLHRDNN APSPRLPRPT TEDTPAVSTP SEEGLLGDIV PQTMRNP
101: DPAENSTASA EKTPPPETPV KEKKKAQKRI RQPRFAFMTK SDVDNLEDGY RWRKYGQKAV KNSPFPRSYY RCTNSRCTVK KRVERSSDDP SIVITTYEGQ
201: HCHQTIGFPR GGILTAHDPH SFTSHHHLPP PLPNPYYYQE LLHQLHRDNN APSPRLPRPT TEDTPAVSTP SEEGLLGDIV PQTMRNP
Arabidopsis Description
WRKY57At1g69310 [Source:UniProtKB/TrEMBL;Acc:Q147N6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.