Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09083 | Canola | nucleus | 97.76 | 97.44 |
| Bra012614.1-P | Field mustard | nucleus | 97.44 | 97.44 |
| CDX90417 | Canola | nucleus | 97.44 | 97.12 |
| CDX76541 | Canola | nucleus | 82.69 | 87.76 |
| CDY08894 | Canola | nucleus | 82.05 | 87.07 |
| CDX78832 | Canola | nucleus | 84.29 | 85.39 |
| AT4G18170.1 | Thale cress | nucleus | 86.54 | 84.91 |
| CDX99495 | Canola | nucleus | 83.65 | 83.65 |
| CDY03224 | Canola | nucleus | 58.65 | 57.01 |
| CDY35159 | Canola | nucleus | 58.33 | 56.7 |
| CDY33471 | Canola | nucleus | 58.33 | 56.35 |
| CDX77655 | Canola | nucleus | 58.33 | 56.35 |
| CDY43969 | Canola | nucleus | 56.09 | 55.2 |
| CDY72079 | Canola | nucleus | 19.55 | 54.95 |
| VIT_10s0003g02810.t01 | Wine grape | nucleus | 46.79 | 45.77 |
| KRH58435 | Soybean | nucleus | 49.04 | 42.74 |
| CDY26310 | Canola | nucleus | 37.18 | 42.49 |
| CDX99859 | Canola | nucleus | 36.86 | 42.12 |
| CDY43194 | Canola | nucleus | 37.18 | 41.88 |
| CDX87722 | Canola | nucleus | 41.99 | 41.85 |
| KRH42308 | Soybean | nucleus | 49.36 | 41.51 |
| CDX98155 | Canola | nucleus | 37.5 | 41.2 |
| CDX77096 | Canola | nucleus | 18.91 | 40.97 |
| CDX70492 | Canola | nucleus | 17.63 | 37.41 |
| CDX78504 | Canola | nucleus | 17.63 | 37.41 |
| CDX69672 | Canola | nucleus | 17.31 | 36.73 |
| CDX97223 | Canola | nucleus | 17.31 | 36.73 |
| GSMUA_Achr6P27090_001 | Banana | nucleus | 33.97 | 35.33 |
| OQU78504 | Sorghum | nucleus | 29.49 | 35.11 |
| CDX83415 | Canola | nucleus, plastid | 21.15 | 35.11 |
| CDX95615 | Canola | nucleus, plastid | 21.15 | 34.74 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.09 | 33.68 |
| GSMUA_Achr9P06750_001 | Banana | nucleus | 31.73 | 33.56 |
| CDX87064 | Canola | nucleus | 18.27 | 33.33 |
| CDY48151 | Canola | nucleus | 18.27 | 33.33 |
| CDY24990 | Canola | nucleus | 17.63 | 32.54 |
| CDY05537 | Canola | nucleus | 17.31 | 32.14 |
| CDY37794 | Canola | nucleus | 31.73 | 31.63 |
| CDX80094 | Canola | nucleus | 31.73 | 31.33 |
| CDY44466 | Canola | nucleus | 17.63 | 31.25 |
| CDY30483 | Canola | nucleus | 21.79 | 30.91 |
| CDY71963 | Canola | nucleus | 21.15 | 30.84 |
| CDY23453 | Canola | nucleus | 21.47 | 30.73 |
| CDY48258 | Canola | nucleus | 21.15 | 30.7 |
| CDX88219 | Canola | nucleus | 17.31 | 30.68 |
| CDY52627 | Canola | nucleus | 17.31 | 30.68 |
| CDY39732 | Canola | nucleus | 17.31 | 30.68 |
| CDY51420 | Canola | nucleus | 30.77 | 29.63 |
| TraesCS1D01G430000.1 | Wheat | nucleus | 27.88 | 29.39 |
| TraesCS1A01G421800.1 | Wheat | nucleus | 26.92 | 29.37 |
| TraesCS1B01G453200.1 | Wheat | nucleus | 26.92 | 29.27 |
| CDY40910 | Canola | nucleus | 27.56 | 29.25 |
| CDX95947 | Canola | nucleus | 27.56 | 29.25 |
| CDY54139 | Canola | nucleus | 27.88 | 29.19 |
| CDY18694 | Canola | nucleus | 16.03 | 28.9 |
| CDY27500 | Canola | nucleus | 30.77 | 28.83 |
| CDY38208 | Canola | nucleus | 16.99 | 28.49 |
| Os05t0583000-01 | Rice | nucleus | 30.77 | 28.49 |
| TraesCS1D01G429800.1 | Wheat | nucleus | 26.28 | 28.47 |
| TraesCS1A01G421900.1 | Wheat | nucleus | 18.91 | 28.37 |
| CDY04276 | Canola | nucleus | 25.96 | 28.22 |
| CDY11416 | Canola | nucleus | 26.92 | 28.19 |
| HORVU1Hr1G092130.1 | Barley | nucleus | 27.88 | 28.16 |
| CDY07352 | Canola | nucleus | 25.96 | 28.03 |
| TraesCS1D01G429900.1 | Wheat | nucleus | 27.56 | 28.01 |
| CDY34393 | Canola | nucleus | 16.99 | 27.89 |
| CDY25554 | Canola | nucleus | 16.67 | 27.66 |
| CDX76630 | Canola | nucleus | 26.28 | 27.61 |
| TraesCS1B01G453300.1 | Wheat | nucleus | 27.56 | 27.56 |
| CDY72613 | Canola | nucleus | 28.53 | 27.55 |
| CDY50313 | Canola | nucleus | 27.24 | 27.51 |
| CDY55479 | Canola | nucleus | 16.35 | 27.42 |
| CDX81259 | Canola | nucleus | 17.31 | 27.14 |
| CDY08849 | Canola | nucleus | 17.63 | 26.7 |
| CDY14512 | Canola | nucleus | 17.63 | 26.7 |
| CDY05620 | Canola | nucleus | 32.37 | 25.83 |
| CDY53184 | Canola | nucleus | 24.04 | 25.6 |
| CDX72701 | Canola | nucleus | 23.08 | 25.53 |
| CDY41978 | Canola | nucleus | 24.04 | 25.17 |
| CDY12144 | Canola | nucleus | 23.4 | 24.75 |
| CDX85413 | Canola | nucleus | 31.41 | 24.56 |
| CDY31301 | Canola | nucleus | 15.38 | 24.37 |
| CDY46824 | Canola | nucleus | 15.06 | 16.21 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078EPW1 | EnsemblPlants:CDY01523 | ProteinID:CDY01523 | ProteinID:CDY01523.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00112549001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PIRSF:PIRSF038130 | PFscan:PS50811 |
| PANTHER:PTHR31221 | PANTHER:PTHR31221:SF56 | SMART:SM00774 | SUPFAM:SSF118290 | InterPro:TF_WRKY_IIc | UniParc:UPI0004EDF546 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
BnaC07g35130D
Coordinates
chrLK031927:+:368031..369158
Molecular Weight (calculated)
35011.0 Da
IEP (calculated)
6.723
GRAVY (calculated)
-1.018
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNETKDFYN YQFPSSFSLY EMMNLPTSAP SSYGNNGFDP SSYSFTDCLQ SSPGAYDSLL QKNFGLSPPS SEVFNSSIDQ ESKRDVTNDV TGETPTRVSA
101: PSSSSEADHP GEDSGKSQIR KRDLAEDGGE ENQNSKKVGK TKKNEEKKQR EPRVSFMTKS EVDHLEDGYR WRKYGQKAVK NSPYPRSYYR CTTQKCNVKK
201: RVERSFQDPT VVITTYEGQH NHPIPTNLRG SSAAAAMYSD FMTPRSFTHD MFRTAAYTSG GSVEGALDYG YGQSVYGSVN ANPNSSHQNY HQGGEYELLK
301: EIIPSIFFKQ EH
101: PSSSSEADHP GEDSGKSQIR KRDLAEDGGE ENQNSKKVGK TKKNEEKKQR EPRVSFMTKS EVDHLEDGYR WRKYGQKAVK NSPYPRSYYR CTTQKCNVKK
201: RVERSFQDPT VVITTYEGQH NHPIPTNLRG SSAAAAMYSD FMTPRSFTHD MFRTAAYTSG GSVEGALDYG YGQSVYGSVN ANPNSSHQNY HQGGEYELLK
301: EIIPSIFFKQ EH
001: MSNETRDLYN YQYPSSFSLH EMMNLPTSNP SSYGNLPSQN GFNPSTYSFT DCLQSSPAAY ESLLQKTFGL SPSSSEVFNS SIDQEPNRDV TNDVINGGAC
101: NETETRVSPS NSSSSEADHP GEDSGKSRRK RELVGEEDQI SKKVGKTKKT EVKKQREPRV SFMTKSEVDH LEDGYRWRKY GQKAVKNSPY PRSYYRCTTQ
201: KCNVKKRVER SFQDPTVVIT TYEGQHNHPI PTNLRGSSAA AAMFSADLMT PRSFAHDMFR TAAYTNGGSV AAALDYGYGQ SGYGSVNSNP SSHQVYHQGG
301: EYELLREIFP SIFFKQEP
101: NETETRVSPS NSSSSEADHP GEDSGKSRRK RELVGEEDQI SKKVGKTKKT EVKKQREPRV SFMTKSEVDH LEDGYRWRKY GQKAVKNSPY PRSYYRCTTQ
201: KCNVKKRVER SFQDPTVVIT TYEGQHNHPI PTNLRGSSAA AAMFSADLMT PRSFAHDMFR TAAYTNGGSV AAALDYGYGQ SGYGSVNSNP SSHQVYHQGG
301: EYELLREIFP SIFFKQEP
Arabidopsis Description
WRKY28WRKY28 [Source:UniProtKB/TrEMBL;Acc:A0A178V3M3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.