Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30483 | Canola | nucleus | 94.95 | 94.09 |
| CDX95615 | Canola | nucleus, plastid | 79.36 | 91.05 |
| CDX83415 | Canola | nucleus, plastid | 77.52 | 89.89 |
| CDY71963 | Canola | nucleus | 88.07 | 89.72 |
| CDY48258 | Canola | nucleus | 87.61 | 88.84 |
| GSMUA_Achr4P17890_001 | Banana | nucleus | 39.45 | 76.79 |
| GSMUA_Achr7P06860_001 | Banana | nucleus | 40.37 | 75.21 |
| CDY72079 | Canola | nucleus | 33.49 | 65.77 |
| KRH66475 | Soybean | nucleus | 57.8 | 52.94 |
| KRH48843 | Soybean | nucleus | 56.88 | 52.32 |
| Solyc01g089960.2.1 | Tomato | nucleus | 56.42 | 52.12 |
| KRH40189 | Soybean | nucleus | 53.67 | 49.16 |
| PGSC0003DMT400080069 | Potato | nucleus | 55.5 | 48.21 |
| HORVU6Hr1G061940.1 | Barley | nucleus | 46.33 | 44.49 |
| TraesCS2A01G392100.1 | Wheat | nucleus | 46.33 | 44.1 |
| HORVU2Hr1G093350.3 | Barley | nucleus | 46.33 | 43.91 |
| Zm00001d017444_P001 | Maize | extracellular, vacuole | 46.33 | 43.72 |
| KXG31104 | Sorghum | nucleus | 47.71 | 43.7 |
| TraesCS2B01G410400.1 | Wheat | nucleus | 45.87 | 43.67 |
| TraesCS2D01G390200.1 | Wheat | nucleus | 45.87 | 43.67 |
| Zm00001d051328_P002 | Maize | nucleus | 46.79 | 43.4 |
| TraesCS6A01G242000.1 | Wheat | nucleus | 46.33 | 42.8 |
| TraesCS6B01G282500.1 | Wheat | nucleus | 46.33 | 42.8 |
| TraesCS6D01G223900.1 | Wheat | cytosol | 46.33 | 42.8 |
| Os04t0545000-01 | Rice | cytosol | 45.87 | 40.0 |
| CDX77096 | Canola | nucleus | 25.69 | 38.89 |
| KXG26824 | Sorghum | nucleus | 45.87 | 37.17 |
| Zm00001d002794_P001 | Maize | nucleus | 44.95 | 34.51 |
| CDX70492 | Canola | nucleus | 22.94 | 34.01 |
| CDX78504 | Canola | nucleus | 22.94 | 34.01 |
| CDX69672 | Canola | nucleus | 22.48 | 33.33 |
| CDX97223 | Canola | nucleus | 22.02 | 32.65 |
| CDY24990 | Canola | nucleus | 25.23 | 32.54 |
| CDY05537 | Canola | nucleus | 24.77 | 32.14 |
| CDY41978 | Canola | nucleus | 43.12 | 31.54 |
| CDY53184 | Canola | nucleus | 42.2 | 31.4 |
| CDX72701 | Canola | nucleus | 40.37 | 31.21 |
| CDX87064 | Canola | nucleus | 24.31 | 30.99 |
| CDX88219 | Canola | nucleus | 24.77 | 30.68 |
| CDY48151 | Canola | nucleus | 23.85 | 30.41 |
| CDY12144 | Canola | nucleus | 40.83 | 30.17 |
| CDY52627 | Canola | nucleus | 24.31 | 30.11 |
| CDY44466 | Canola | nucleus | 24.31 | 30.11 |
| CDY39732 | Canola | nucleus | 24.31 | 30.11 |
| CDY38208 | Canola | nucleus | 24.31 | 28.49 |
| CDY34393 | Canola | nucleus | 24.77 | 28.42 |
| CDY55479 | Canola | nucleus | 23.85 | 27.96 |
| CDY18694 | Canola | nucleus | 22.02 | 27.75 |
| CDY25554 | Canola | nucleus | 23.85 | 27.66 |
| CDY14512 | Canola | nucleus | 24.31 | 25.73 |
| CDY08849 | Canola | nucleus | 24.31 | 25.73 |
| CDY31301 | Canola | nucleus | 22.94 | 25.38 |
| CDX81259 | Canola | nucleus | 22.48 | 24.62 |
| CDY43194 | Canola | nucleus | 30.28 | 23.83 |
| CDX99859 | Canola | nucleus | 29.82 | 23.81 |
| CDX76541 | Canola | nucleus | 31.65 | 23.47 |
| CDY26310 | Canola | nucleus | 29.36 | 23.44 |
| CDX98155 | Canola | nucleus | 30.28 | 23.24 |
| CDY08894 | Canola | nucleus | 31.19 | 23.13 |
| CDX90417 | Canola | nucleus | 31.65 | 22.04 |
| CDY09083 | Canola | nucleus | 31.65 | 22.04 |
| CDX99495 | Canola | nucleus | 31.19 | 21.79 |
| CDX78832 | Canola | nucleus | 30.73 | 21.75 |
| CDY54139 | Canola | nucleus | 29.36 | 21.48 |
| CDY01523 | Canola | nucleus | 30.73 | 21.47 |
| CDY40910 | Canola | nucleus | 28.9 | 21.43 |
| CDY04276 | Canola | nucleus | 27.98 | 21.25 |
| CDY07352 | Canola | nucleus | 27.98 | 21.11 |
| CDX95947 | Canola | nucleus | 28.44 | 21.09 |
| CDY43969 | Canola | nucleus | 30.28 | 20.82 |
| CDY37794 | Canola | nucleus | 29.36 | 20.45 |
| CDX87722 | Canola | nucleus | 29.36 | 20.45 |
| CDY33471 | Canola | nucleus | 30.28 | 20.43 |
| CDX77655 | Canola | nucleus | 30.28 | 20.43 |
| CDY50313 | Canola | nucleus | 28.9 | 20.39 |
| CDX80094 | Canola | nucleus | 29.36 | 20.25 |
| CDY03224 | Canola | nucleus | 29.82 | 20.25 |
| CDY35159 | Canola | nucleus | 29.36 | 19.94 |
| CDX76630 | Canola | nucleus | 26.61 | 19.53 |
| CDY11416 | Canola | nucleus | 26.15 | 19.13 |
| CDY51420 | Canola | nucleus | 27.98 | 18.83 |
| CDY72613 | Canola | nucleus | 27.52 | 18.58 |
| CDY27500 | Canola | nucleus | 27.98 | 18.32 |
| CDY05620 | Canola | nucleus | 29.82 | 16.62 |
| CDY46824 | Canola | nucleus | 21.56 | 16.21 |
| CDX85413 | Canola | nucleus | 29.36 | 16.04 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078GFP4 | UniProt:A0A078GFP4 | EnsemblPlants:CDY23453 | ProteinID:CDY23453 |
| ProteinID:CDY23453.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00022071001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF17 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EB381C | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaC04g49810DBnaC04g49810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GFP4]
Coordinates
chrLK032143:-:536369..538019
Molecular Weight (calculated)
24616.5 Da
IEP (calculated)
9.155
GRAVY (calculated)
-0.835
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGRRAVVN NYDLQQVTSS ATIQENMNFL VPFEETNVLT FFSSSSSSSL PSPSFPIHNS SSTTNTTHAP LGFSNNLQVG GPLGSKVVND DHENIGGGMN
101: NDVHSNSWWR SSSGSGEMRS KVKTRRKLRE PRFCFQTKSD VDVLADGYKW RKYGQKVVKN SLHPRSYYRC THNNCRVKKR VERLSEDCRM VITTYEGRHN
201: HIPSDDSTSP DHDYLSSF
101: NDVHSNSWWR SSSGSGEMRS KVKTRRKLRE PRFCFQTKSD VDVLADGYKW RKYGQKVVKN SLHPRSYYRC THNNCRVKKR VERLSEDCRM VITTYEGRHN
201: HIPSDDSTSP DHDYLSSF
001: MEGGGRRVFS NYDLQQVTSS STTIQENMNF LVPFEETNVL TFFSSSSSSS LSSPSFPIHN SSSTTTTHAP LGFSNNLQGG GPLGSKVVND DQENFGGGTN
101: NDAHSNSWWR SNSGSGDMKN KVKIRRKLRE PRFCFQTKSD VDVLDDGYKW RKYGQKVVKN SLHPRSYYRC THNNCRVKKR VERLSEDCRM VITTYEGRHN
201: HIPSDDSTSP DHDCLSSF
101: NDAHSNSWWR SNSGSGDMKN KVKIRRKLRE PRFCFQTKSD VDVLDDGYKW RKYGQKVVKN SLHPRSYYRC THNNCRVKKR VERLSEDCRM VITTYEGRHN
201: HIPSDDSTSP DHDCLSSF
Arabidopsis Description
WRKY12At2g44745 [Source:UniProtKB/TrEMBL;Acc:Q1PEU5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.