Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G392100.1 | Wheat | nucleus | 97.82 | 97.82 |
| HORVU2Hr1G093350.3 | Barley | nucleus | 96.51 | 96.09 |
| TraesCS2B01G410400.1 | Wheat | nucleus | 96.07 | 96.07 |
| GSMUA_Achr4P17890_001 | Banana | nucleus | 39.74 | 81.25 |
| KXG26824 | Sorghum | nucleus | 78.6 | 66.91 |
| Zm00001d002794_P001 | Maize | nucleus | 76.86 | 61.97 |
| TraesCS6D01G223900.1 | Wheat | cytosol | 55.02 | 53.39 |
| CDX83415 | Canola | nucleus, plastid | 40.17 | 48.94 |
| CDX95615 | Canola | nucleus, plastid | 39.74 | 47.89 |
| KRH66475 | Soybean | nucleus | 48.91 | 47.06 |
| AT2G44745.1 | Thale cress | nucleus | 44.54 | 46.79 |
| Solyc01g089960.2.1 | Tomato | nucleus | 48.03 | 46.61 |
| KRH48843 | Soybean | nucleus | 48.03 | 46.41 |
| CDY71963 | Canola | nucleus | 43.23 | 46.26 |
| Bra000362.1-P | Field mustard | nucleus | 42.36 | 46.19 |
| Bra004864.1-P | Field mustard | nucleus | 43.23 | 46.05 |
| CDY48258 | Canola | nucleus | 43.23 | 46.05 |
| TraesCS1D01G351600.1 | Wheat | plastid | 27.07 | 45.93 |
| CDY23453 | Canola | nucleus | 43.67 | 45.87 |
| CDY30483 | Canola | nucleus | 43.67 | 45.45 |
| PGSC0003DMT400080069 | Potato | nucleus | 48.91 | 44.62 |
| KRH40189 | Soybean | nucleus | 44.98 | 43.28 |
| TraesCS3D01G118100.1 | Wheat | nucleus, plastid | 38.86 | 33.97 |
| TraesCS2D01G011700.1 | Wheat | nucleus | 29.69 | 33.01 |
| TraesCS3D01G280200.1 | Wheat | nucleus | 26.64 | 27.48 |
| TraesCS1D01G122400.1 | Wheat | nucleus | 21.4 | 25.26 |
| TraesCS1D01G363300.1 | Wheat | plastid | 24.45 | 25.11 |
| TraesCS3D01G248500.1 | Wheat | mitochondrion | 21.83 | 24.39 |
| TraesCS1D01G362900.1 | Wheat | nucleus, plastid | 23.14 | 24.09 |
| TraesCS1D01G429800.1 | Wheat | nucleus | 27.95 | 22.22 |
| TraesCS3D01G212700.1 | Wheat | nucleus | 23.14 | 22.18 |
| TraesCS1D01G430000.1 | Wheat | nucleus | 27.95 | 21.62 |
| TraesCS3D01G113200.1 | Wheat | nucleus | 20.96 | 21.52 |
| TraesCS1D01G429900.1 | Wheat | nucleus | 28.82 | 21.5 |
| TraesCS2D01G262100.1 | Wheat | nucleus | 26.64 | 21.4 |
| TraesCS5D01G404400.1 | Wheat | nucleus | 27.51 | 20.32 |
| TraesCS3D01G226300.1 | Wheat | nucleus | 28.38 | 18.84 |
| TraesCS3D01G242500.1 | Wheat | nucleus | 29.69 | 18.58 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31221 | PANTHER:PTHR31221:SF17 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS2D01G390200 | EnsemblPlants:TraesCS2D01G390200.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2D:-:497922376..497926294
Molecular Weight (calculated)
24964.5 Da
IEP (calculated)
8.556
GRAVY (calculated)
-0.573
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGSQLGAC LPSLYALDPY ASPPLLAPLP NQHKLHQLPL VLQEQPGNHG VMFSSDHGGG LYPLLPGIPF CHSAAACEKS TGFAPLGGTG EAGTSAARAG
101: NEFASATTTT TASCHGPSSW WKGAEKGKMK VRRKMREPRF CFQTRSEVDV LDDGYKWRKY GQKVVKNSLH PRSYYRCTHS NCRVKKRVER LSEDCRMVIT
201: TYEGRHTHTP CSDDDAGGDH TGSCAFTSF
101: NEFASATTTT TASCHGPSSW WKGAEKGKMK VRRKMREPRF CFQTRSEVDV LDDGYKWRKY GQKVVKNSLH PRSYYRCTHS NCRVKKRVER LSEDCRMVIT
201: TYEGRHTHTP CSDDDAGGDH TGSCAFTSF
001: MGAINQGISL FDESQTVINP INTNHLGFFF SFPSHSTLSS SSSSSSSSPS SLVSPFLGHN SLNSFLHNNP SSFISHPQDS INLMTNLPET LISSLSSSKQ
101: RDDHDGFLNL DHHRLTGSIS SQRPLSNPWA WSCQAGYGSS QKNNHGSEID VDDNDDEVGD GGGINDDDNG RHHHHDTPSR HDKHNTASLG VVSSLKMKKL
201: KTRRKVREPR FCFKTLSEVD VLDDGYRWRK YGQKVVKNTQ HPRSYYRCTQ DKCRVKKRVE RLADDPRMVI TTYEGRHLHS PSNHLDDDSL STSHLHPPLS
301: NFFW
101: RDDHDGFLNL DHHRLTGSIS SQRPLSNPWA WSCQAGYGSS QKNNHGSEID VDDNDDEVGD GGGINDDDNG RHHHHDTPSR HDKHNTASLG VVSSLKMKKL
201: KTRRKVREPR FCFKTLSEVD VLDDGYRWRK YGQKVVKNTQ HPRSYYRCTQ DKCRVKKRVE RLADDPRMVI TTYEGRHLHS PSNHLDDDSL STSHLHPPLS
301: NFFW
Arabidopsis Description
WRKY13WRKY13 [Source:UniProtKB/TrEMBL;Acc:A0A178UV80]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.