Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G240200.1 | Wheat | nucleus | 96.65 | 96.65 |
| TraesCS3A01G209800.1 | Wheat | nucleus | 90.8 | 95.18 |
| HORVU3Hr1G050590.3 | Barley | nucleus | 87.03 | 78.2 |
| Os01t0584900-01 | Rice | nucleus | 49.37 | 47.97 |
| EES00970 | Sorghum | nucleus | 43.1 | 47.69 |
| TraesCS1D01G351600.1 | Wheat | plastid | 21.34 | 37.78 |
| TraesCS1D01G122400.1 | Wheat | nucleus | 29.29 | 36.08 |
| TraesCS1D01G362900.1 | Wheat | nucleus, plastid | 31.38 | 34.09 |
| TraesCS3D01G248500.1 | Wheat | mitochondrion | 28.87 | 33.66 |
| TraesCS1D01G363300.1 | Wheat | plastid | 30.54 | 32.74 |
| TraesCS3D01G113200.1 | Wheat | nucleus | 28.45 | 30.49 |
| TraesCS3D01G280200.1 | Wheat | nucleus | 23.85 | 25.68 |
| TraesCS2D01G011700.1 | Wheat | nucleus | 20.5 | 23.79 |
| TraesCS2D01G390200.1 | Wheat | nucleus | 22.18 | 23.14 |
| TraesCS6D01G223900.1 | Wheat | cytosol | 21.76 | 22.03 |
| TraesCS3D01G118100.1 | Wheat | nucleus, plastid | 22.59 | 20.61 |
| TraesCS2D01G262100.1 | Wheat | nucleus | 23.85 | 20.0 |
| TraesCS5D01G404400.1 | Wheat | nucleus | 25.1 | 19.35 |
| TraesCS1D01G430000.1 | Wheat | nucleus | 23.43 | 18.92 |
| TraesCS1D01G429800.1 | Wheat | nucleus | 22.59 | 18.75 |
| TraesCS1D01G429900.1 | Wheat | nucleus | 22.59 | 17.59 |
| TraesCS3D01G226300.1 | Wheat | nucleus | 23.85 | 16.52 |
| TraesCS3D01G242500.1 | Wheat | nucleus | 24.69 | 16.12 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31221 | PANTHER:PTHR31221:SF43 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS3D01G212700 | EnsemblPlants:TraesCS3D01G212700.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3D:+:286189559..286190475
Molecular Weight (calculated)
26331.4 Da
IEP (calculated)
8.120
GRAVY (calculated)
-0.832
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSYSSLLSV SPGEQIGGYA DEGDHDDMAA ATNYPSSFCF DFGEEYYSLA VAATASYPLH AQQQQPPTQA DSHHSGKAAS TTSSSRGLDN INTSLTSSDA
101: RSKGSKIAFK TRSEVEVLDD GYRWRKYGKK MVKNSPNPRN YYRCSSEGCR VKKRVERDRD DERFVITTYD GVHNHLAPLP PRGCAGYSLS LAQTRLDEGS
201: SPLPVQGRRC FLDTMKMHAA GSQQGCTPVP QPRKLERDN
101: RSKGSKIAFK TRSEVEVLDD GYRWRKYGKK MVKNSPNPRN YYRCSSEGCR VKKRVERDRD DERFVITTYD GVHNHLAPLP PRGCAGYSLS LAQTRLDEGS
201: SPLPVQGRRC FLDTMKMHAA GSQQGCTPVP QPRKLERDN
001: MNDADTNLGS SFSDDTHSVF EFPELDLSDE WMDDDLVSAV SGMNQSYGYQ TSDVAGALFS GSSSCFSHPE SPSTKTYVAA TATASADNQN KKEKKKIKGR
101: VAFKTRSEVE VLDDGFKWRK YGKKMVKNSP HPRNYYKCSV DGCPVKKRVE RDRDDPSFVI TTYEGSHNHS SMN
101: VAFKTRSEVE VLDDGFKWRK YGKKMVKNSP HPRNYYKCSV DGCPVKKRVE RDRDDPSFVI TTYEGSHNHS SMN
Arabidopsis Description
WRKY50Probable WRKY transcription factor 50 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.