Factsheet for Os01t0584900-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

nucleus: 23061987

gfp PMID: 23061987 doi

A Lan, J Huang, W Zhao, Y Peng, Z Chen, D Kang

Beïjing Key Laboratory of Crop Genetic Improvement, College of Agronomy and Biotechnology, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES00970	Sorghum	nucleus	50.81	57.87
TraesCS3A01G209800.1	Wheat	nucleus	47.15	50.88
TraesCS3D01G212700.1	Wheat	nucleus	47.97	49.37
TraesCS3B01G240200.1	Wheat	nucleus	47.56	48.95
HORVU3Hr1G050590.3	Barley	nucleus	46.75	43.23
Os01t0186000-01	Rice	cytosol, nucleus	27.24	34.72
Os05t0183100-01	Rice	nucleus	28.05	32.55
Os05t0537100-00	Rice	cytosol, plastid	28.05	31.22
Os01t0714800-01	Rice	plastid	28.86	28.98
Os11t0490900-01	Rice	nucleus	23.98	24.38
Os04t0545000-01	Rice	cytosol	22.76	22.4
Os01t0734000-01	Rice	nucleus	22.76	22.05
Os03t0758000-01	Rice	nucleus, plastid	20.33	21.64
Os07t0111400-00	Rice	nucleus	23.58	20.0
Os01t0182700-01	Rice	nucleus	22.36	19.64
Os02t0652100-01	Rice	extracellular, mitochondrion, nucleus	13.01	19.63
Os05t0583000-01	Rice	nucleus	23.17	16.91
Os01t0626400-01	Rice	nucleus	23.98	15.57
Os05t0565900-00	Rice	nucleus	24.8	14.56
Os01t0665500-00	Rice	plastid	1.63	3.51

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EntrezGene:4327651	EMBL:AK108522	EMBL:AY341846	ProteinID:BAB61842.1
ProteinID:BAC01237.1	ProteinID:BAF05336.1	ProteinID:BAS72891.1	ProteinID:DAA05142.1	ProteinID:EAZ12480.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
EnsemblPlantsGene:Os01g0584900	EnsemblPlants:Os01t0584900-01	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF79
UniProt:Q94D50	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI00000ABCBF	InterPro:WRKY_dom	InterPro:WRKY_dom_sf
RefSeq:XP_015635031.1	SEG:seg	:	:	:	:

Description

WRKY GENE 77WRKY transcription factor 28-like (WRKY5) (WRKY transcription factor 77). (Os01t0584900-01)

Coordinates

chr1:+:22731943..22733237

Molecular Weight (calculated)

26502.1 Da

IEP (calculated)

7.653

GRAVY (calculated)

-0.549

Length

246 amino acids

Sequence
(BLAST)

001: MSSLYPSLLS LSESPAEYRQ VGGGRYAGED VVDDDDDMAA VADAVSSYLS FDMDDVEYYT PEVGFHSKQH NPPPVAAAPL EAGGGREQSR REAAVNLGKM
101: DRGPAPVSGG AATGGVPRSK NGSKIAFKTR SEVDVLDDGY RWRKYGKKMV KNSPNPRNYY RCSSEGCRVK KRVERARDDA RFVVTTYDGV HNHPAPLHLR
201: PQLPPPGGYS IAGAPAVVAP HGRLGLEEAE VIALFRGTTA TSLLLP

Best Arabidopsis Sequence Match ( AT5G26170.1 )
(BLAST)

001: MNDADTNLGS SFSDDTHSVF EFPELDLSDE WMDDDLVSAV SGMNQSYGYQ TSDVAGALFS GSSSCFSHPE SPSTKTYVAA TATASADNQN KKEKKKIKGR
101: VAFKTRSEVE VLDDGFKWRK YGKKMVKNSP HPRNYYKCSV DGCPVKKRVE RDRDDPSFVI TTYEGSHNHS SMN

Arabidopsis Description

WRKY50Probable WRKY transcription factor 50 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWQ5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.