Factsheet for Os01t0186000-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15622	Soybean	nucleus	25.39	72.06
Zm00001d008793_P001	Maize	nucleus	46.11	38.86
VIT_04s0008g01470.t01	Wine grape	nucleus	33.16	38.55
KRH61557	Soybean	nucleus	32.12	38.51
CDX87064	Canola	nucleus	32.64	36.84
GSMUA_Achr7P09680_001	Banana	nucleus	38.34	36.63
KRH05396	Soybean	nucleus	31.09	36.59
CDX88219	Canola	nucleus	33.16	36.36
Bra020546.1-P	Field mustard	nucleus	31.61	36.31
CDY24990	Canola	nucleus	31.61	36.09
KRH52231	Soybean	nucleus	30.05	36.02
Bra009885.1-P	Field mustard	nucleus	32.64	35.8
CDY05537	Canola	nucleus	31.09	35.71
CDY48151	Canola	nucleus	31.61	35.67
AT5G26170.1	Thale cress	nucleus	31.61	35.26
CDY52627	Canola	nucleus	32.12	35.23
Os05t0183100-01	Rice	nucleus	36.79	33.49
EES00157	Sorghum	nucleus	44.56	33.08
Zm00001d039531_P001	Maize	nucleus	46.63	32.97
Bra036563.1-P	Field mustard	nucleus	26.42	32.28
Solyc08g062490.2.1	Tomato	nucleus	29.53	31.49
Os05t0537100-00	Rice	cytosol, plastid	32.64	28.51
Os01t0584900-01	Rice	nucleus	34.72	27.24
Os01t0714800-01	Rice	plastid	33.68	26.53
Os11t0490900-01	Rice	nucleus	27.46	21.9
PGSC0003DMT400021144	Potato	nucleus	14.51	21.88
Os02t0652100-01	Rice	extracellular, mitochondrion, nucleus	17.62	20.86
Os03t0758000-01	Rice	nucleus, plastid	23.83	19.91
Os04t0545000-01	Rice	cytosol	25.39	19.6
Os01t0734000-01	Rice	nucleus	24.87	18.9
Os07t0111400-00	Rice	nucleus	26.94	17.93
Os01t0182700-01	Rice	nucleus	23.83	16.43
Os05t0583000-01	Rice	nucleus	28.5	16.32
Os01t0626400-01	Rice	nucleus	29.02	14.78
Os05t0565900-00	Rice	nucleus	26.94	12.41
Os01t0665500-00	Rice	plastid	2.07	3.51

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A0P0UZM3	ProteinID:BAS70781.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	EnsemblPlantsGene:Os01g0186000
EnsemblPlants:Os01t0186000-01	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF43	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000393AA92	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

WRKY GENE 10Similar to WRKY transcription factor 10. (Os01t0186000-01)

Coordinates

chr1:-:4572565..4573271

Molecular Weight (calculated)

19947.1 Da

IEP (calculated)

7.926

GRAVY (calculated)

-0.367

Length

193 amino acids

Sequence
(BLAST)

001: CFPPLMADHI VDGGGGGGCS FGEFLELGHS VYSLPLPPPP SQPVVVAGGN NDQYGVSSSS SAAATTSRIG FRTRSEVEVL DDGFKWRKYG KKAVKSSPNP
101: RNYYRCSAAG CGVKKRVERD GDDPRYVVTT YDGVHNHATP GCVGGGGHLP YPTSAAPPWS VPAAAASPPP AHAQAWGAPL HAAAAAHSSE SSF

Best Arabidopsis Sequence Match ( AT5G26170.1 )
(BLAST)

001: MNDADTNLGS SFSDDTHSVF EFPELDLSDE WMDDDLVSAV SGMNQSYGYQ TSDVAGALFS GSSSCFSHPE SPSTKTYVAA TATASADNQN KKEKKKIKGR
101: VAFKTRSEVE VLDDGFKWRK YGKKMVKNSP HPRNYYKCSV DGCPVKKRVE RDRDDPSFVI TTYEGSHNHS SMN

Arabidopsis Description

WRKY50Probable WRKY transcription factor 50 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWQ5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.