Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88219 | Canola | nucleus | 97.16 | 97.16 |
| Bra036563.1-P | Field mustard | nucleus | 76.14 | 84.81 |
| Bra020546.1-P | Field mustard | nucleus | 78.98 | 82.74 |
| AT5G26170.1 | Thale cress | nucleus | 79.55 | 80.92 |
| KRH15622 | Soybean | nucleus | 27.84 | 72.06 |
| GSMUA_Achr3P20450_001 | Banana | cytosol, nucleus, plastid | 30.68 | 57.45 |
| KRH61557 | Soybean | nucleus | 48.86 | 53.42 |
| KRH52231 | Soybean | nucleus | 47.16 | 51.55 |
| VIT_04s0008g01470.t01 | Wine grape | nucleus | 44.89 | 47.59 |
| KRH05396 | Soybean | nucleus | 44.32 | 47.56 |
| Solyc08g062490.2.1 | Tomato | nucleus | 38.64 | 37.57 |
| GSMUA_Achr7P09680_001 | Banana | nucleus | 40.34 | 35.15 |
| Bra037796.1-P | Field mustard | nucleus | 32.95 | 34.52 |
| Bra040557.1-P | Field mustard | nucleus | 27.27 | 33.33 |
| Bra008858.1-P | Field mustard | nucleus | 27.27 | 32.65 |
| Zm00001d011133_P001 | Maize | plastid | 36.36 | 32.65 |
| Bra006178.1-P | Field mustard | nucleus | 27.27 | 32.65 |
| Os01t0186000-01 | Rice | cytosol, nucleus | 35.8 | 32.64 |
| Zm00001d037607_P001 | Maize | nucleus | 35.8 | 32.31 |
| Bra024328.1-P | Field mustard | nucleus | 37.5 | 32.04 |
| PGSC0003DMT400021144 | Potato | nucleus | 23.3 | 32.03 |
| Zm00001d009939_P001 | Maize | nucleus | 36.93 | 31.71 |
| TraesCS1D01G122400.1 | Wheat | nucleus | 34.66 | 31.44 |
| HORVU1Hr1G027700.1 | Barley | nucleus | 35.23 | 31.16 |
| Os05t0183100-01 | Rice | nucleus | 37.5 | 31.13 |
| EES19157 | Sorghum | nucleus | 36.36 | 31.07 |
| Bra031900.1-P | Field mustard | nucleus | 34.66 | 30.96 |
| Zm00001d043663_P001 | Maize | plastid | 36.93 | 30.81 |
| EES18577 | Sorghum | plastid | 38.07 | 30.59 |
| TraesCS3B01G277300.1 | Wheat | plastid | 34.66 | 30.5 |
| TraesCS3D01G248500.1 | Wheat | mitochondrion | 34.66 | 29.76 |
| TraesCS1B01G374700.1 | Wheat | nucleus, plastid | 37.5 | 29.6 |
| TraesCS1A01G121500.1 | Wheat | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 32.95 | 29.59 |
| TraesCS3A01G248700.1 | Wheat | plastid | 34.09 | 29.56 |
| TraesCS1A01G358400.1 | Wheat | plastid | 36.93 | 29.55 |
| HORVU0Hr1G001430.1 | Barley | plastid | 36.36 | 29.36 |
| TraesCS1D01G362900.1 | Wheat | nucleus, plastid | 36.36 | 29.09 |
| TraesCS1B01G374900.1 | Wheat | plastid | 36.36 | 29.09 |
| Os05t0537100-00 | Rice | cytosol, plastid | 36.36 | 28.96 |
| Zm00001d038843_P001 | Maize | plastid | 36.36 | 28.96 |
| HORVU3Hr1G067510.1 | Barley | mitochondrion, plastid | 34.66 | 28.77 |
| TraesCS1D01G363300.1 | Wheat | plastid | 36.36 | 28.7 |
| TraesCS1A01G358100.1 | Wheat | nucleus, plastid | 35.8 | 28.64 |
| KXG33244 | Sorghum | plastid | 35.8 | 28.0 |
| Bra000362.1-P | Field mustard | nucleus | 32.39 | 27.14 |
| TraesCS3A01G111200.1 | Wheat | nucleus | 34.09 | 26.67 |
| TraesCS3D01G113200.1 | Wheat | nucleus | 33.52 | 26.46 |
| Bra025490.1-P | Field mustard | nucleus | 26.14 | 26.44 |
| Zm00001d008793_P001 | Maize | nucleus | 34.09 | 26.2 |
| TraesCS3B01G129900.1 | Wheat | nucleus | 32.39 | 25.68 |
| Bra027768.1-P | Field mustard | nucleus | 27.27 | 25.67 |
| Bra027675.1-P | Field mustard | nucleus | 27.27 | 25.4 |
| Os01t0714800-01 | Rice | plastid | 35.23 | 25.31 |
| Bra004864.1-P | Field mustard | nucleus | 30.68 | 25.12 |
| HORVU3Hr1G020140.1 | Barley | mitochondrion | 34.09 | 24.39 |
| EES00157 | Sorghum | nucleus | 34.09 | 23.08 |
| Zm00001d039531_P001 | Maize | nucleus | 35.23 | 22.71 |
| HORVU1Hr1G080300.1 | Barley | nucleus | 35.8 | 22.58 |
| Bra032340.1-P | Field mustard | nucleus | 31.25 | 20.15 |
| Bra030178.1-P | Field mustard | nucleus | 31.25 | 19.86 |
| Bra010683.1-P | Field mustard | nucleus | 31.82 | 18.92 |
| Bra040926.1-P | Field mustard | nucleus | 31.25 | 18.71 |
| Bra004002.1-P | Field mustard | nucleus | 30.68 | 18.69 |
| Bra011861.1-P | Field mustard | nucleus | 31.25 | 18.46 |
| Bra013289.1-P | Field mustard | nucleus | 31.82 | 18.18 |
| Bra004466.1-P | Field mustard | nucleus | 32.95 | 18.18 |
| Bra033616.1-P | Field mustard | nucleus | 30.11 | 18.15 |
| Bra038313.1-P | Field mustard | nucleus | 30.68 | 18.06 |
| Bra004370.1-P | Field mustard | nucleus | 29.55 | 17.69 |
| Bra037637.1-P | Field mustard | nucleus | 18.18 | 17.68 |
| Bra021393.1-P | Field mustard | nucleus | 32.39 | 17.65 |
| Bra012614.1-P | Field mustard | nucleus | 31.25 | 17.63 |
| Bra007674.1-P | Field mustard | nucleus | 29.55 | 17.45 |
| Bra022033.1-P | Field mustard | nucleus | 31.25 | 17.35 |
| Bra025021.1-P | Field mustard | nucleus | 29.55 | 16.1 |
| Bra017561.1-P | Field mustard | nucleus | 28.98 | 15.89 |
| Bra036138.1-P | Field mustard | nucleus | 30.68 | 15.3 |
| Bra010032.1-P | Field mustard | nucleus | 31.82 | 14.04 |
| Bra020628.1-P | Field mustard | nucleus | 30.68 | 13.78 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EnsemblPlantsGene:Bra009885 | EnsemblPlants:Bra009885.1 | EnsemblPlants:Bra009885.1-P | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 |
| UniProt:M4D087 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF43 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI000253F3C0 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
AT5G26170 (E=4e-061) WRKY50, ATWRKY50 | WRKY50; transcription factor
Coordinates
chrA06:-:17888571..17889450
Molecular Weight (calculated)
19575.5 Da
IEP (calculated)
7.042
GRAVY (calculated)
-0.873
Length
176 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDAETNLGR RFSDDTYSGF DLPDLYLSDE WMDDDLVSAV SGMNHSYGYQ TSDSAHAAAF FSGSSRGFGH PESPCANASV AAATATASAE KQIKKEKKKV
101: KERIAFKTQS EVEVLDDGFK WRKYGKKMVK NSPNPRNYYK CSADGCPVKK RVERDGDDPS FVITTYEGFH NHSSKN
101: KERIAFKTQS EVEVLDDGFK WRKYGKKMVK NSPNPRNYYK CSADGCPVKK RVERDGDDPS FVITTYEGFH NHSSKN
001: MNDADTNLGS SFSDDTHSVF EFPELDLSDE WMDDDLVSAV SGMNQSYGYQ TSDVAGALFS GSSSCFSHPE SPSTKTYVAA TATASADNQN KKEKKKIKGR
101: VAFKTRSEVE VLDDGFKWRK YGKKMVKNSP HPRNYYKCSV DGCPVKKRVE RDRDDPSFVI TTYEGSHNHS SMN
101: VAFKTRSEVE VLDDGFKWRK YGKKMVKNSP HPRNYYKCSV DGCPVKKRVE RDRDDPSFVI TTYEGSHNHS SMN
Arabidopsis Description
WRKY50Probable WRKY transcription factor 50 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.