CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d009939_P001	Maize	nucleus	89.32	89.76
Zm00001d037607_P001	Maize	nucleus	80.58	85.13
KRH15622	Soybean	nucleus	23.3	70.59
HORVU1Hr1G027700.1	Barley	nucleus	64.56	66.83
TraesCS1D01G122400.1	Wheat	nucleus	62.14	65.98
TraesCS1A01G121500.1	Wheat	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	60.19	63.27
Os05t0183100-01	Rice	nucleus	61.65	59.91
KRH61557	Soybean	nucleus	36.41	46.58
KRH52231	Soybean	nucleus	33.98	43.48
VIT_04s0008g01470.t01	Wine grape	nucleus	34.95	43.37
TraesCS3A01G111200.1	Wheat	nucleus	45.63	41.78
TraesCS3D01G113200.1	Wheat	nucleus	45.15	41.7
TraesCS3B01G129900.1	Wheat	nucleus	44.66	41.44
GSMUA_Achr7P09680_001	Banana	nucleus	40.29	41.09
KRH05396	Soybean	nucleus	32.04	40.24
EES18577	Sorghum	plastid	41.75	39.27
CDX87064	Canola	nucleus	32.52	39.18
AT5G26170.1	Thale cress	nucleus	32.52	38.73
CDY48151	Canola	nucleus	32.04	38.6
HORVU3Hr1G020140.1	Barley	mitochondrion	45.63	38.21
Solyc08g062490.2.1	Tomato	nucleus	33.5	38.12
Bra020546.1-P	Field mustard	nucleus	30.1	36.9
CDY24990	Canola	nucleus	30.1	36.69
Bra009885.1-P	Field mustard	nucleus	31.07	36.36
CDX88219	Canola	nucleus	31.07	36.36
CDY05537	Canola	nucleus	29.61	36.31
EES00157	Sorghum	nucleus	45.15	35.77
CDY52627	Canola	nucleus	30.1	35.23
KXG33244	Sorghum	plastid	38.35	35.11
Bra036563.1-P	Field mustard	nucleus	26.7	34.81
EES00970	Sorghum	nucleus	34.47	32.87
PGSC0003DMT400021144	Potato	nucleus	18.45	29.69
EES01425	Sorghum	nucleus	30.1	25.2
EES19853	Sorghum	nucleus, plastid	27.67	23.65
EES08501	Sorghum	nucleus	25.73	23.56
KXG31104	Sorghum	nucleus	24.27	21.01
KXG26824	Sorghum	nucleus	27.18	20.82
OQU78504	Sorghum	nucleus	25.24	19.85
KXG34273	Sorghum	mitochondrion	23.79	18.01
OQU86187	Sorghum	mitochondrion, nucleus	25.24	17.63
EES01107	Sorghum	nucleus	28.16	16.07
EER90854	Sorghum	nucleus	25.24	15.71
EES18690	Sorghum	nucleus	28.16	13.68
EES03393	Sorghum	nucleus	26.21	13.17

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EntrezGene:8064208	UniProt:C5YU85	EnsemblPlants:EES19157	ProteinID:EES19157
ProteinID:EES19157.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF43
SMART:SM00774	EnsemblPlantsGene:SORBI_3009G068900	SUPFAM:SSF118290	unigene:Sbi.49	UniParc:UPI00005B0D1D	InterPro:WRKY_dom
InterPro:WRKY_dom_sf	RefSeq:XP_002440727.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:7567284..7568764

Molecular Weight (calculated)

22092.4 Da

IEP (calculated)

7.545

GRAVY (calculated)

-0.512

Length

206 amino acids

Sequence
(BLAST)

001: MQMAASLGLN PEALFASYSS AYSSSSPFVS DYAASFPAAV DSATAFSAEL DDLHHFDYSP APIFTAVGAG AGGDRNEKMM MWCEGGGDEK RLRSSGRIGF
101: RTRSEVEILD DGFKWRKYGK KAVKNSPNPR NYYRCSSEGC GVKKRVERDR DDPRYVITTY DGVHNHASPG AAAIIQYGGG GGNSGFYSPP HSGSPSAASY
201: SGSFVF

Best Arabidopsis Sequence Match ( AT5G26170.1 )
(BLAST)

001: MNDADTNLGS SFSDDTHSVF EFPELDLSDE WMDDDLVSAV SGMNQSYGYQ TSDVAGALFS GSSSCFSHPE SPSTKTYVAA TATASADNQN KKEKKKIKGR
101: VAFKTRSEVE VLDDGFKWRK YGKKMVKNSP HPRNYYKCSV DGCPVKKRVE RDRDDPSFVI TTYEGSHNHS SMN

Arabidopsis Description

WRKY50Probable WRKY transcription factor 50 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWQ5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.