Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G113200.1 | Wheat | nucleus | 88.0 | 88.79 |
| TraesCS3B01G129900.1 | Wheat | nucleus | 86.67 | 87.84 |
| HORVU3Hr1G020140.1 | Barley | mitochondrion | 88.89 | 81.3 |
| KRH15622 | Soybean | nucleus | 21.33 | 70.59 |
| Zm00001d037607_P001 | Maize | nucleus | 40.89 | 47.18 |
| EES19157 | Sorghum | nucleus | 41.78 | 45.63 |
| Zm00001d009939_P001 | Maize | nucleus | 40.89 | 44.88 |
| TraesCS1A01G121500.1 | Wheat | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 38.22 | 43.88 |
| KRH61557 | Soybean | nucleus | 29.33 | 40.99 |
| VIT_04s0008g01470.t01 | Wine grape | nucleus | 29.78 | 40.36 |
| KRH05396 | Soybean | nucleus | 28.89 | 39.63 |
| Os05t0183100-01 | Rice | nucleus | 37.33 | 39.62 |
| GSMUA_Achr7P09680_001 | Banana | nucleus | 33.78 | 37.62 |
| KRH52231 | Soybean | nucleus | 26.22 | 36.65 |
| CDX87064 | Canola | nucleus | 27.56 | 36.26 |
| TraesCS1A01G358400.1 | Wheat | plastid | 35.11 | 35.91 |
| AT5G26170.1 | Thale cress | nucleus | 27.11 | 35.26 |
| CDY48151 | Canola | nucleus | 26.67 | 35.09 |
| TraesCS1A01G358100.1 | Wheat | nucleus, plastid | 34.22 | 35.0 |
| CDX88219 | Canola | nucleus | 27.11 | 34.66 |
| Bra020546.1-P | Field mustard | nucleus | 25.78 | 34.52 |
| CDY24990 | Canola | nucleus | 25.78 | 34.32 |
| Solyc08g062490.2.1 | Tomato | nucleus | 27.56 | 34.25 |
| Bra009885.1-P | Field mustard | nucleus | 26.67 | 34.09 |
| TraesCS1A01G348600.1 | Wheat | plastid | 20.44 | 34.07 |
| CDY05537 | Canola | nucleus | 25.33 | 33.93 |
| CDY52627 | Canola | nucleus | 26.22 | 33.52 |
| TraesCS3A01G248700.1 | Wheat | plastid | 29.33 | 32.51 |
| Bra036563.1-P | Field mustard | nucleus | 22.22 | 31.65 |
| TraesCS3A01G209800.1 | Wheat | nucleus | 31.56 | 31.14 |
| PGSC0003DMT400021144 | Potato | nucleus | 14.67 | 25.78 |
| TraesCS3A01G280400.1 | Wheat | nucleus | 24.0 | 24.32 |
| TraesCS2A01G011000.1 | Wheat | nucleus | 20.89 | 22.93 |
| TraesCS2A01G392100.1 | Wheat | nucleus | 21.78 | 21.4 |
| TraesCS3A01G116200.1 | Wheat | plastid | 23.11 | 19.85 |
| TraesCS1A01G421800.1 | Wheat | nucleus | 24.44 | 19.23 |
| TraesCS2A01G261900.1 | Wheat | nucleus | 24.44 | 19.23 |
| TraesCS6A01G242000.1 | Wheat | nucleus | 20.0 | 19.07 |
| TraesCS5A01G395100.1 | Wheat | nucleus | 24.89 | 18.06 |
| TraesCS1A01G421900.1 | Wheat | nucleus | 15.56 | 16.83 |
| TraesCS3A01G228600.1 | Wheat | nucleus | 24.44 | 15.94 |
| TraesCS3A01G242500.1 | Wheat | nucleus | 25.33 | 15.62 |
| TraesCS1A01G401800.1 | Wheat | nucleus | 24.0 | 13.57 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31221 | PANTHER:PTHR31221:SF43 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS3A01G111200 | EnsemblPlants:TraesCS3A01G111200.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3A:+:78710239..78710916
Molecular Weight (calculated)
23773.5 Da
IEP (calculated)
7.193
GRAVY (calculated)
-0.404
Length
225 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASLGLTGH ETSYPAHPAA SSLYNFQAGD PFAAAAGGAA ELSFPELVDA ARPSDYSLLP AFGAAGGEAM NMYERSVVFP MTTSYYCDGA GMFDGDASAR
101: ARGGGIGAMA GRPSGRIGFR TRSEVEVLDD GFRWRKYGKK AVKSSPNLRN YYRCSAEGCG VKKRVERDRD DPHYVLTTYD GVHNHVTPGS TPRASPAYSA
201: PAAPAWTWSE LHAAAAAGAH SSESY
101: ARGGGIGAMA GRPSGRIGFR TRSEVEVLDD GFRWRKYGKK AVKSSPNLRN YYRCSAEGCG VKKRVERDRD DPHYVLTTYD GVHNHVTPGS TPRASPAYSA
201: PAAPAWTWSE LHAAAAAGAH SSESY
001: MNDADTNLGS SFSDDTHSVF EFPELDLSDE WMDDDLVSAV SGMNQSYGYQ TSDVAGALFS GSSSCFSHPE SPSTKTYVAA TATASADNQN KKEKKKIKGR
101: VAFKTRSEVE VLDDGFKWRK YGKKMVKNSP HPRNYYKCSV DGCPVKKRVE RDRDDPSFVI TTYEGSHNHS SMN
101: VAFKTRSEVE VLDDGFKWRK YGKKMVKNSP HPRNYYKCSV DGCPVKKRVE RDRDDPSFVI TTYEGSHNHS SMN
Arabidopsis Description
WRKY50Probable WRKY transcription factor 50 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.