Factsheet for TraesCS1A01G401800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G088300.1	Barley	nucleus	65.08	89.93
EES18690	Sorghum	nucleus	56.78	53.3
Os05t0565900-00	Rice	nucleus	56.03	53.22
Zm00001d039032_P001	Maize	nucleus	52.26	50.98
TraesCS3A01G242500.1	Wheat	nucleus	44.97	49.04
TraesCS1A01G348600.1	Wheat	plastid	15.58	45.93
GSMUA_Achr3P31310_001	Banana	nucleus	25.13	43.67
GSMUA_Achr6P22160_001	Banana	nucleus	32.16	36.47
GSMUA_Achr1P04770_001	Banana	nucleus	26.38	35.47
TraesCS5A01G395100.1	Wheat	nucleus	26.63	34.19
GSMUA_Achr7P25400_001	Banana	nucleus	27.89	34.05
TraesCS1A01G421800.1	Wheat	nucleus	24.37	33.92
TraesCS3A01G228600.1	Wheat	nucleus	29.4	33.91
TraesCS1A01G421900.1	Wheat	nucleus	17.34	33.17
TraesCS2A01G011000.1	Wheat	nucleus	17.09	33.17
Solyc02g071130.2.1	Tomato	nucleus	26.13	32.81
TraesCS2A01G261900.1	Wheat	nucleus	23.37	32.52
PGSC0003DMT400025113	Potato	nucleus	25.88	32.39
GSMUA_Achr4P14990_001	Banana	nucleus	26.13	31.33
GSMUA_Achr4P02800_001	Banana	nucleus	25.63	31.0
TraesCS2A01G392100.1	Wheat	nucleus	16.83	29.26
TraesCS3A01G280400.1	Wheat	nucleus	16.08	28.83
TraesCS3A01G248700.1	Wheat	plastid	14.07	27.59
TraesCS6A01G242000.1	Wheat	nucleus	16.33	27.54
TraesCS3A01G209800.1	Wheat	nucleus	15.33	26.75
TraesCS1A01G358400.1	Wheat	plastid	14.32	25.91
GSMUA_Achr4P07920_001	Banana	nucleus	30.4	24.85
TraesCS1A01G358100.1	Wheat	nucleus, plastid	13.57	24.55
TraesCS1A01G121500.1	Wheat	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	12.06	24.49
TraesCS3A01G116200.1	Wheat	plastid	16.08	24.43
TraesCS3A01G111200.1	Wheat	nucleus	13.57	24.0

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR31221	PANTHER:PTHR31221:SF83	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:TraesCS1A01G401800	EnsemblPlants:TraesCS1A01G401800.1
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1A:+:565292128..565294766

Molecular Weight (calculated)

42092.2 Da

IEP (calculated)

7.585

GRAVY (calculated)

-0.619

Length

398 amino acids

Sequence
(BLAST)

001: MSGASHDQHR RHLSGDFDEL ASLFAQRPAD AASPSPMMLM QPQTPWFFAD YLQTPGMDYD DAFARDFIGS PAGGVGGVEE VKREMLASDG AAGAVVVPGG
101: GPGGTAHSVS VSSTSSEAGV GGSGGAVEDE AGKCKQEEGE GDDESKQAAA DGEADKTKKG AAKGKGAARV KGEKRPRQAR FAFMTKSEVD HLEDGYRWRK
201: YGQKAVKNSP FPRSYYRCTT QKCPVKKRVE RSYQDAAVVI TTYEGKHTHP IPATLRGANH LLAAHAHAHG GHGLIHPGMF RMPAPPGAFR PGDALGSFLQ
301: QQHAAMQHQQ QVAAAGMAMR QANAMASGHM QAPPADRGLA AAMAGGTTGN STHTVSSSSA DPLRMEQLMA QDYGLLQDML MPPSFAHSDN SNNNSNRH

Best Arabidopsis Sequence Match ( AT1G29860.1 )
(BLAST)

001: MDDHVEHNYN TSLEEVHFKS LSDCLQSSLV MDYNSLEKVF KFSPYSSPFQ SVSPSVNNPY LNLTSNSPVV SSSSNEGEPK ENTNDKSDQM EDNEGDLHGV
101: GESSKQLTKQ GKKKGEKKER EVRVAFMTKS EIDHLEDGYR WRKYGQKAVK NSPYPRSYYR CTTQKCNVKK RVERSFQDPS IVITTYEGKH NHPIPSTLRG
201: TVAAEHLLVH RGGGGSLLHS FPRHHQDFLM MKHSPANYQS VGSLSYEHGH GTSSYNFNNN QPVVDYGLLQ DIVPSMFSKN ES

Arabidopsis Description

WRKY71Probable WRKY transcription factor 71 [Source:UniProtKB/Swiss-Prot;Acc:Q93WV4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.