Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P25400_001 | Banana | nucleus | 64.44 | 65.03 |
| GSMUA_Achr4P14990_001 | Banana | nucleus | 65.35 | 64.76 |
| GSMUA_Achr1P04770_001 | Banana | nucleus | 49.54 | 55.07 |
| GSMUA_Achr5P06260_001 | Banana | nucleus | 16.41 | 52.43 |
| GSMUA_Achr4P17890_001 | Banana | nucleus | 16.41 | 48.21 |
| GSMUA_Achr3P20450_001 | Banana | cytosol, nucleus, plastid | 13.37 | 46.81 |
| GSMUA_Achr7P06860_001 | Banana | nucleus | 16.41 | 46.15 |
| GSMUA_Achr3P31310_001 | Banana | nucleus | 31.31 | 44.98 |
| GSMUA_Achr7P00580_001 | Banana | cytosol, nucleus, plastid | 20.06 | 44.3 |
| GSMUA_Achr9P07230_001 | Banana | mitochondrion | 15.2 | 43.48 |
| GSMUA_Achr6P34870_001 | Banana | nucleus | 19.15 | 42.57 |
| Solyc02g071130.2.1 | Tomato | nucleus | 40.73 | 42.27 |
| PGSC0003DMT400025113 | Potato | nucleus | 40.12 | 41.51 |
| GSMUA_Achr9P06750_001 | Banana | nucleus | 33.43 | 37.29 |
| GSMUA_Achr9P29350_001 | Banana | nucleus | 17.93 | 37.11 |
| GSMUA_Achr6P27090_001 | Banana | nucleus | 33.74 | 37.0 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.7 | 35.07 |
| GSMUA_Achr7P24780_001 | Banana | nucleus | 18.54 | 33.89 |
| GSMUA_Achr9P01400_001 | Banana | nucleus | 18.54 | 33.7 |
| GSMUA_Achr6P22160_001 | Banana | nucleus | 35.26 | 33.05 |
| GSMUA_AchrUn_... | Banana | nucleus | 17.63 | 32.77 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.79 | 32.56 |
| GSMUA_Achr6P06360_001 | Banana | nucleus | 17.63 | 31.52 |
| GSMUA_Achr4P23360_001 | Banana | nucleus | 24.92 | 31.3 |
| HORVU1Hr1G088300.1 | Barley | nucleus | 27.05 | 30.9 |
| GSMUA_Achr7P23980_001 | Banana | mitochondrion | 15.5 | 30.18 |
| TraesCS3A01G242500.1 | Wheat | nucleus | 33.13 | 29.86 |
| TraesCS3D01G242500.1 | Wheat | nucleus | 33.13 | 29.78 |
| GSMUA_Achr4P08880_001 | Banana | nucleus | 14.89 | 29.7 |
| GSMUA_Achr8P26240_001 | Banana | nucleus | 15.5 | 29.65 |
| TraesCS3B01G270500.1 | Wheat | nucleus | 33.13 | 29.62 |
| HORVU3Hr1G060500.1 | Barley | nucleus | 32.22 | 29.12 |
| Zm00001d043950_P001 | Maize | nucleus | 33.43 | 28.87 |
| GSMUA_Achr8P10740_001 | Banana | nucleus | 27.36 | 28.75 |
| EES03393 | Sorghum | nucleus | 34.65 | 27.8 |
| EES18690 | Sorghum | nucleus | 35.56 | 27.59 |
| GSMUA_Achr6P22920_001 | Banana | mitochondrion | 18.84 | 27.31 |
| Zm00001d039032_P001 | Maize | nucleus | 33.43 | 26.96 |
| GSMUA_Achr7P09680_001 | Banana | nucleus | 16.41 | 26.73 |
| GSMUA_Achr4P07920_001 | Banana | nucleus | 38.91 | 26.28 |
| Os05t0565900-00 | Rice | nucleus | 33.43 | 26.25 |
| GSMUA_Achr7P13310_001 | Banana | nucleus | 18.84 | 26.05 |
| Zm00001d011527_P001 | Maize | nucleus | 32.52 | 25.85 |
| TraesCS1A01G401800.1 | Wheat | nucleus | 31.0 | 25.63 |
| GSMUA_Achr10P... | Banana | nucleus | 18.54 | 22.18 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr4G02800_001 | EnsemblPlants:GSMUA_Achr4P02800_001 | EnsemblPlants:GSMUA_Achr4T02800_001 | InterPro:IPR003657 | InterPro:IPR036576 |
| UniProt:M0SKJ7 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF56 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI0002963BCD | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
Putative OsWRKY11 - Superfamily of TFs having WRKY and zinc finger domains, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G02800_001]
Coordinates
chr4:+:2325632..2327379
Molecular Weight (calculated)
36242.4 Da
IEP (calculated)
8.352
GRAVY (calculated)
-0.821
Length
329 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGDHEEADR YHIPFHDELS SLFPQKPAGG DANGTGSLGF DQQAESPLVN FTDAFRGSNM DYGVIARALG LSCPAPSKFL RSSGTASREL MVDVGNGRKS
101: LVPSLGCSLG ATPMTPNSSI SSSSTEAAGE EAAERCKKDE KKQGEEQKKQ AKGDEEGGDK PKTLSTAKKK AEKRQREPAF AFVTKSEVDH LEDGYRWRKY
201: GQKAVKNSPY PRSYYRCTTQ KCPVKKRVER SYQDPKIVVT TYEGKHTHQS PAAVRGSTHL VAPPTTMPVS FYHDLMMHQV PQLSNTCQQG NTNPNMYLAN
301: LPPALQQHQF PEYGLLQDVL FSFDHGSQP
101: LVPSLGCSLG ATPMTPNSSI SSSSTEAAGE EAAERCKKDE KKQGEEQKKQ AKGDEEGGDK PKTLSTAKKK AEKRQREPAF AFVTKSEVDH LEDGYRWRKY
201: GQKAVKNSPY PRSYYRCTTQ KCPVKKRVER SYQDPKIVVT TYEGKHTHQS PAAVRGSTHL VAPPTTMPVS FYHDLMMHQV PQLSNTCQQG NTNPNMYLAN
301: LPPALQQHQF PEYGLLQDVL FSFDHGSQP
001: MSNETRDLYN YQYPSSFSLH EMMNLPTSNP SSYGNLPSQN GFNPSTYSFT DCLQSSPAAY ESLLQKTFGL SPSSSEVFNS SIDQEPNRDV TNDVINGGAC
101: NETETRVSPS NSSSSEADHP GEDSGKSRRK RELVGEEDQI SKKVGKTKKT EVKKQREPRV SFMTKSEVDH LEDGYRWRKY GQKAVKNSPY PRSYYRCTTQ
201: KCNVKKRVER SFQDPTVVIT TYEGQHNHPI PTNLRGSSAA AAMFSADLMT PRSFAHDMFR TAAYTNGGSV AAALDYGYGQ SGYGSVNSNP SSHQVYHQGG
301: EYELLREIFP SIFFKQEP
101: NETETRVSPS NSSSSEADHP GEDSGKSRRK RELVGEEDQI SKKVGKTKKT EVKKQREPRV SFMTKSEVDH LEDGYRWRKY GQKAVKNSPY PRSYYRCTTQ
201: KCNVKKRVER SFQDPTVVIT TYEGQHNHPI PTNLRGSSAA AAMFSADLMT PRSFAHDMFR TAAYTNGGSV AAALDYGYGQ SGYGSVNSNP SSHQVYHQGG
301: EYELLREIFP SIFFKQEP
Arabidopsis Description
WRKY28WRKY28 [Source:UniProtKB/TrEMBL;Acc:A0A178V3M3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.