Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P00580_001 | Banana | cytosol, nucleus, plastid | 53.38 | 53.02 |
| GSMUA_Achr3P20450_001 | Banana | cytosol, nucleus, plastid | 30.41 | 47.87 |
| GSMUA_Achr5P06260_001 | Banana | nucleus | 31.08 | 44.66 |
| GSMUA_Achr4P17890_001 | Banana | nucleus | 33.11 | 43.75 |
| GSMUA_Achr7P06860_001 | Banana | nucleus | 32.43 | 41.03 |
| GSMUA_Achr9P07230_001 | Banana | mitochondrion | 31.08 | 40.0 |
| KRH70870 | Soybean | nucleus | 64.86 | 32.76 |
| KRH75010 | Soybean | nucleus | 64.86 | 32.32 |
| GSMUA_Achr4P23360_001 | Banana | nucleus | 55.41 | 31.3 |
| VIT_01s0011g00720.t01 | Wine grape | nucleus | 62.16 | 30.16 |
| GSMUA_Achr3P31310_001 | Banana | nucleus | 46.62 | 30.13 |
| GSMUA_Achr9P29350_001 | Banana | nucleus | 31.08 | 28.93 |
| GSMUA_Achr7P24780_001 | Banana | nucleus | 33.78 | 27.78 |
| PGSC0003DMT400072958 | Potato | mitochondrion, nucleus | 60.14 | 27.3 |
| GSMUA_Achr7P23980_001 | Banana | mitochondrion | 31.08 | 27.22 |
| Solyc05g012500.2.1 | Tomato | nucleus | 60.14 | 27.22 |
| GSMUA_Achr9P01400_001 | Banana | nucleus | 31.76 | 25.97 |
| GSMUA_Achr8P26240_001 | Banana | nucleus | 29.73 | 25.58 |
| GSMUA_Achr4P08880_001 | Banana | nucleus | 28.38 | 25.45 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.41 | 25.42 |
| GSMUA_Achr6P06360_001 | Banana | nucleus | 31.08 | 25.0 |
| GSMUA_AchrUn_... | Banana | nucleus | 47.3 | 23.26 |
| GSMUA_Achr6P27090_001 | Banana | nucleus | 46.62 | 23.0 |
| GSMUA_Achr7P09680_001 | Banana | nucleus | 31.08 | 22.77 |
| GSMUA_AchrUn_... | Banana | nucleus | 43.92 | 22.57 |
| GSMUA_Achr1P04770_001 | Banana | nucleus | 43.92 | 21.96 |
| GSMUA_Achr6P22920_001 | Banana | mitochondrion | 33.11 | 21.59 |
| GSMUA_Achr8P10740_001 | Banana | nucleus | 44.59 | 21.09 |
| GSMUA_Achr9P06750_001 | Banana | nucleus | 41.89 | 21.02 |
| GSMUA_Achr7P25400_001 | Banana | nucleus | 45.95 | 20.86 |
| GSMUA_Achr6P22160_001 | Banana | nucleus | 47.97 | 20.23 |
| GSMUA_Achr7P13310_001 | Banana | nucleus | 31.08 | 19.33 |
| GSMUA_Achr4P02800_001 | Banana | nucleus | 42.57 | 19.15 |
| GSMUA_Achr4P14990_001 | Banana | nucleus | 42.57 | 18.98 |
| GSMUA_Achr10P... | Banana | nucleus | 29.73 | 16.0 |
| GSMUA_Achr4P07920_001 | Banana | nucleus | 45.95 | 13.96 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr6G34870_001 | EnsemblPlants:GSMUA_Achr6P34870_001 | EnsemblPlants:GSMUA_Achr6T34870_001 | InterPro:IPR003657 | InterPro:IPR036576 |
| UniProt:M0TCT0 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF83 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI0002950FD5 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
Probable WRKY transcription factor 57 [Source:GMGC_GENE;Acc:GSMUA_Achr6G34870_001]
Coordinates
chr6:+:33302507..33303186
Molecular Weight (calculated)
16488.5 Da
IEP (calculated)
9.410
GRAVY (calculated)
-0.689
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKSEIDHLE DGYRWRKYGQ KAVKNSPFPR SYYRCTNSKC TVKKRVERSS EDPTIVITTY EGQHCHHTVS YPRGGSHLHT AAALAAAQQL ALSAPQLYAP
101: PSPFPQSPSL IHPQQEQRPP SLLDRTLALP AVDEGLLGDI VSPATRNR
101: PSPFPQSPSL IHPQQEQRPP SLLDRTLALP AVDEGLLGDI VSPATRNR
001: MNDPDNPDLS NDDSAWRELT LTAQDSDFFD RDTSNILSDF GWNLHHSSDH PHSLRFDSDL TQTTGVKPTT VTSSCSSSAA VSVAVTSTNN NPSATSSSSE
101: DPAENSTASA EKTPPPETPV KEKKKAQKRI RQPRFAFMTK SDVDNLEDGY RWRKYGQKAV KNSPFPRSYY RCTNSRCTVK KRVERSSDDP SIVITTYEGQ
201: HCHQTIGFPR GGILTAHDPH SFTSHHHLPP PLPNPYYYQE LLHQLHRDNN APSPRLPRPT TEDTPAVSTP SEEGLLGDIV PQTMRNP
101: DPAENSTASA EKTPPPETPV KEKKKAQKRI RQPRFAFMTK SDVDNLEDGY RWRKYGQKAV KNSPFPRSYY RCTNSRCTVK KRVERSSDDP SIVITTYEGQ
201: HCHQTIGFPR GGILTAHDPH SFTSHHHLPP PLPNPYYYQE LLHQLHRDNN APSPRLPRPT TEDTPAVSTP SEEGLLGDIV PQTMRNP
Arabidopsis Description
WRKY57At1g69310 [Source:UniProtKB/TrEMBL;Acc:Q147N6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.