Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P00580_001 | Banana | cytosol, nucleus, plastid | 32.06 | 56.38 |
| GSMUA_Achr6P34870_001 | Banana | nucleus | 31.3 | 55.41 |
| GSMUA_Achr3P20450_001 | Banana | cytosol, nucleus, plastid | 17.94 | 50.0 |
| GSMUA_Achr5P06260_001 | Banana | nucleus | 19.08 | 48.54 |
| GSMUA_Achr4P17890_001 | Banana | nucleus | 20.61 | 48.21 |
| GSMUA_Achr7P06860_001 | Banana | nucleus | 20.23 | 45.3 |
| GSMUA_Achr9P07230_001 | Banana | mitochondrion | 19.08 | 43.48 |
| Os03t0758000-01 | Rice | nucleus, plastid | 37.79 | 42.86 |
| AT1G69310.2 | Thale cress | nucleus | 40.08 | 36.59 |
| Os07t0111400-00 | Rice | nucleus | 40.46 | 36.55 |
| CDY04276 | Canola | nucleus | 39.69 | 36.24 |
| TraesCS2B01G280300.1 | Wheat | nucleus | 39.31 | 36.14 |
| HORVU0Hr1G003340.1 | Barley | nucleus | 38.93 | 35.79 |
| TraesCS2D01G262100.1 | Wheat | nucleus | 38.93 | 35.79 |
| CDY40910 | Canola | nucleus | 40.08 | 35.71 |
| CDX95947 | Canola | nucleus | 40.08 | 35.71 |
| Bra004370.1-P | Field mustard | nucleus | 40.08 | 35.71 |
| TraesCS2A01G261900.1 | Wheat | nucleus | 38.93 | 35.66 |
| CDY07352 | Canola | nucleus | 38.93 | 35.29 |
| GSMUA_Achr9P29350_001 | Banana | nucleus | 21.37 | 35.22 |
| Bra004002.1-P | Field mustard | nucleus | 38.55 | 34.95 |
| CDY54139 | Canola | nucleus | 39.31 | 34.56 |
| KXG34273 | Sorghum | mitochondrion | 35.88 | 34.56 |
| TraesCS5D01G404400.1 | Wheat | nucleus | 40.84 | 34.52 |
| TraesCS5A01G395100.1 | Wheat | nucleus | 40.46 | 34.19 |
| TraesCS5B01G399900.1 | Wheat | nucleus | 40.46 | 34.08 |
| GSMUA_Achr3P31310_001 | Banana | nucleus | 29.77 | 34.06 |
| GSMUA_Achr7P24780_001 | Banana | nucleus | 23.28 | 33.89 |
| Bra038313.1-P | Field mustard | nucleus | 38.55 | 33.78 |
| EER90854 | Sorghum | nucleus | 42.37 | 33.53 |
| GSMUA_Achr9P01400_001 | Banana | nucleus | 22.9 | 33.15 |
| HORVU5Hr1G096420.20 | Barley | mitochondrion, nucleus | 38.17 | 33.11 |
| GSMUA_Achr7P23980_001 | Banana | mitochondrion | 20.99 | 32.54 |
| Zm00001d034073_P001 | Maize | nucleus | 40.84 | 32.33 |
| CDY50313 | Canola | nucleus | 37.79 | 32.04 |
| Zm00001d018656_P001 | Maize | nucleus | 40.08 | 31.63 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.99 | 31.07 |
| GSMUA_Achr6P06360_001 | Banana | nucleus | 21.76 | 30.98 |
| GSMUA_Achr8P26240_001 | Banana | nucleus | 20.23 | 30.81 |
| GSMUA_Achr4P08880_001 | Banana | nucleus | 19.08 | 30.3 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.82 | 29.86 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.97 | 29.57 |
| GSMUA_Achr1P04770_001 | Banana | nucleus | 32.44 | 28.72 |
| GSMUA_Achr6P27090_001 | Banana | nucleus | 32.06 | 28.0 |
| GSMUA_Achr7P25400_001 | Banana | nucleus | 33.97 | 27.3 |
| GSMUA_Achr6P22920_001 | Banana | mitochondrion | 23.28 | 26.87 |
| GSMUA_Achr6P22160_001 | Banana | nucleus | 35.88 | 26.78 |
| GSMUA_Achr7P09680_001 | Banana | nucleus | 20.61 | 26.73 |
| GSMUA_Achr8P10740_001 | Banana | nucleus | 31.68 | 26.52 |
| GSMUA_Achr9P06750_001 | Banana | nucleus | 28.63 | 25.42 |
| GSMUA_Achr4P02800_001 | Banana | nucleus | 31.3 | 24.92 |
| GSMUA_Achr4P14990_001 | Banana | nucleus | 30.92 | 24.4 |
| GSMUA_Achr7P13310_001 | Banana | nucleus | 20.23 | 22.27 |
| GSMUA_Achr10P... | Banana | nucleus | 19.85 | 18.91 |
| GSMUA_Achr4P07920_001 | Banana | nucleus | 30.53 | 16.43 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr4G23360_001 | EnsemblPlants:GSMUA_Achr4P23360_001 | EnsemblPlants:GSMUA_Achr4T23360_001 | InterPro:IPR003657 | InterPro:IPR036576 |
| UniProt:M0SRE7 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF83 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI00029528C7 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G23360_001]
Coordinates
chr4:+:23475598..23478066
Molecular Weight (calculated)
28891.6 Da
IEP (calculated)
6.789
GRAVY (calculated)
-0.795
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEEEGWLSP TSDASSSWKF RADVSVASLH DLCGGEGVEW CTPARIGDGF PPTFNLPATM EEEGQMNLQP EPGSGNAAAA VASSLSEEPP GMRAAEKANT
101: GAKSGQKRTR QPRFAFMTKS EIEQLEDGYR WRKYGQKAVK NSPFPRSYYR CTNSKCTVKK RVERSSHDPS IVITTYEGQH CHHTISFPSG SIHPRDTRST
201: SDRLALSSPQ RHVHLPTHPG QLVMSDPRYE DPITPFLAER SSSAPTDEGL LDDIVPSGMR RG
101: GAKSGQKRTR QPRFAFMTKS EIEQLEDGYR WRKYGQKAVK NSPFPRSYYR CTNSKCTVKK RVERSSHDPS IVITTYEGQH CHHTISFPSG SIHPRDTRST
201: SDRLALSSPQ RHVHLPTHPG QLVMSDPRYE DPITPFLAER SSSAPTDEGL LDDIVPSGMR RG
001: MNDPDNPDLS NDDSAWRELT LTAQDSDFFD RDTSNILSDF GWNLHHSSDH PHSLRFDSDL TQTTGVKPTT VTSSCSSSAA VSVAVTSTNN NPSATSSSSE
101: DPAENSTASA EKTPPPETPV KEKKKAQKRI RQPRFAFMTK SDVDNLEDGY RWRKYGQKAV KNSPFPRSYY RCTNSRCTVK KRVERSSDDP SIVITTYEGQ
201: HCHQTIGFPR GGILTAHDPH SFTSHHHLPP PLPNPYYYQE LLHQLHRDNN APSPRLPRPT TEDTPAVSTP SEEGLLGDIV PQTMRNP
101: DPAENSTASA EKTPPPETPV KEKKKAQKRI RQPRFAFMTK SDVDNLEDGY RWRKYGQKAV KNSPFPRSYY RCTNSRCTVK KRVERSSDDP SIVITTYEGQ
201: HCHQTIGFPR GGILTAHDPH SFTSHHHLPP PLPNPYYYQE LLHQLHRDNN APSPRLPRPT TEDTPAVSTP SEEGLLGDIV PQTMRNP
Arabidopsis Description
WRKY57At1g69310 [Source:UniProtKB/TrEMBL;Acc:Q147N6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.