Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038313.1-P | Field mustard | nucleus | 93.85 | 96.99 |
| CDY54139 | Canola | nucleus | 93.53 | 96.98 |
| CDY04276 | Canola | nucleus | 73.14 | 78.75 |
| CDY07352 | Canola | nucleus | 73.46 | 78.55 |
| AT1G69310.2 | Thale cress | nucleus | 72.82 | 78.4 |
| CDY40910 | Canola | nucleus | 74.11 | 77.89 |
| CDX95947 | Canola | nucleus | 74.11 | 77.89 |
| KRH75010 | Soybean | nucleus | 48.54 | 50.51 |
| CDY72079 | Canola | nucleus | 18.12 | 50.45 |
| KRH70870 | Soybean | nucleus | 47.57 | 50.17 |
| VIT_01s0011g00720.t01 | Wine grape | nucleus | 47.57 | 48.2 |
| Os03t0758000-01 | Rice | nucleus, plastid | 31.07 | 41.56 |
| Os07t0111400-00 | Rice | nucleus | 37.86 | 40.34 |
| CDX77096 | Canola | nucleus | 18.12 | 38.89 |
| PGSC0003DMT400072958 | Potato | mitochondrion, nucleus | 40.45 | 38.34 |
| Solyc05g012500.2.1 | Tomato | nucleus | 40.13 | 37.92 |
| GSMUA_Achr4P23360_001 | Banana | nucleus | 32.04 | 37.79 |
| TraesCS2B01G280300.1 | Wheat | nucleus | 34.63 | 37.54 |
| HORVU0Hr1G003340.1 | Barley | nucleus | 34.3 | 37.19 |
| TraesCS5D01G404400.1 | Wheat | nucleus | 36.89 | 36.77 |
| CDX97223 | Canola | nucleus | 17.48 | 36.73 |
| CDX78504 | Canola | nucleus | 17.48 | 36.73 |
| CDX70492 | Canola | nucleus | 17.48 | 36.73 |
| CDX69672 | Canola | nucleus | 17.48 | 36.73 |
| TraesCS2A01G261900.1 | Wheat | nucleus | 33.98 | 36.71 |
| TraesCS5B01G399900.1 | Wheat | nucleus | 36.89 | 36.66 |
| TraesCS2D01G262100.1 | Wheat | nucleus | 33.66 | 36.49 |
| KXG34273 | Sorghum | mitochondrion | 32.04 | 36.4 |
| TraesCS5A01G395100.1 | Wheat | nucleus | 36.25 | 36.13 |
| EER90854 | Sorghum | nucleus | 38.19 | 35.65 |
| Zm00001d018656_P001 | Maize | nucleus | 36.57 | 34.04 |
| HORVU5Hr1G096420.20 | Barley | mitochondrion, nucleus | 33.01 | 33.77 |
| Zm00001d034073_P001 | Maize | nucleus | 35.92 | 33.53 |
| CDX83415 | Canola | nucleus, plastid | 19.74 | 32.45 |
| CDX95615 | Canola | nucleus, plastid | 19.74 | 32.11 |
| CDY43194 | Canola | nucleus | 27.83 | 31.05 |
| CDY05537 | Canola | nucleus | 16.83 | 30.95 |
| CDY24990 | Canola | nucleus | 16.83 | 30.77 |
| CDY26310 | Canola | nucleus | 27.18 | 30.77 |
| CDY44466 | Canola | nucleus | 17.48 | 30.68 |
| CDY39732 | Canola | nucleus | 17.48 | 30.68 |
| CDX99859 | Canola | nucleus | 26.86 | 30.4 |
| CDX98155 | Canola | nucleus | 27.83 | 30.28 |
| CDY48258 | Canola | nucleus | 21.04 | 30.23 |
| CDY52627 | Canola | nucleus | 17.15 | 30.11 |
| CDY71963 | Canola | nucleus | 20.71 | 29.91 |
| CDX76541 | Canola | nucleus | 28.16 | 29.59 |
| CDX87064 | Canola | nucleus | 16.18 | 29.24 |
| CDX88219 | Canola | nucleus | 16.5 | 28.98 |
| CDY08894 | Canola | nucleus | 27.51 | 28.91 |
| CDY23453 | Canola | nucleus | 20.39 | 28.9 |
| CDY48151 | Canola | nucleus | 15.86 | 28.66 |
| CDY72613 | Canola | nucleus | 29.77 | 28.48 |
| CDY30483 | Canola | nucleus | 20.06 | 28.18 |
| CDY38208 | Canola | nucleus | 16.83 | 27.96 |
| CDY37794 | Canola | nucleus | 27.83 | 27.48 |
| CDY55479 | Canola | nucleus | 16.5 | 27.42 |
| CDY01523 | Canola | nucleus | 27.51 | 27.24 |
| CDX80094 | Canola | nucleus | 27.83 | 27.22 |
| CDY51420 | Canola | nucleus | 28.48 | 27.16 |
| CDX90417 | Canola | nucleus | 27.51 | 27.16 |
| CDY09083 | Canola | nucleus | 27.51 | 27.16 |
| CDX78832 | Canola | nucleus | 26.86 | 26.95 |
| CDY34393 | Canola | nucleus | 16.5 | 26.84 |
| CDX99495 | Canola | nucleus | 26.86 | 26.6 |
| CDY25554 | Canola | nucleus | 16.18 | 26.6 |
| CDY27500 | Canola | nucleus | 28.48 | 26.43 |
| CDY05620 | Canola | nucleus | 33.01 | 26.09 |
| CDY18694 | Canola | nucleus | 14.56 | 26.01 |
| CDY43969 | Canola | nucleus | 26.21 | 25.55 |
| CDY33471 | Canola | nucleus | 26.21 | 25.08 |
| CDX85413 | Canola | nucleus | 32.36 | 25.06 |
| CDY11416 | Canola | nucleus | 23.95 | 24.83 |
| CDX77655 | Canola | nucleus | 25.89 | 24.77 |
| CDY08849 | Canola | nucleus | 16.5 | 24.76 |
| CDY14512 | Canola | nucleus | 16.5 | 24.76 |
| CDY03224 | Canola | nucleus | 25.57 | 24.61 |
| CDY35159 | Canola | nucleus | 25.24 | 24.3 |
| CDX76630 | Canola | nucleus | 23.3 | 24.24 |
| CDX81259 | Canola | nucleus | 15.53 | 24.12 |
| CDY31301 | Canola | nucleus | 14.56 | 22.84 |
| CDX87722 | Canola | nucleus | 22.98 | 22.68 |
| CDY53184 | Canola | nucleus | 21.04 | 22.18 |
| CDX72701 | Canola | nucleus | 20.06 | 21.99 |
| CDY12144 | Canola | nucleus | 20.71 | 21.69 |
| CDY41978 | Canola | nucleus | 20.06 | 20.81 |
| CDY46824 | Canola | nucleus | 14.56 | 15.52 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078IMR2 | UniProt:A0A078IMR2 | EnsemblPlants:CDY50313 | ProteinID:CDY50313 |
| ProteinID:CDY50313.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00096399001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF77 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EE7E88 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaA02g14710DBnaA02g14710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IMR2]
Coordinates
chrLK032898:-:91085..94149
Molecular Weight (calculated)
34175.2 Da
IEP (calculated)
7.292
GRAVY (calculated)
-0.888
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDPENPDLT NHDSSWTQLT APDSHFFHRD TSDIFSDFVG NLHASSQSDH HHHPHSLRFG TGLTPTSGVP SSVTTTTLPS TPSSSSSPAA ALSVAVTEVS
101: TSNDLPATSS STEDPTENST ASAAKAPETP KNEKKKAQKR IRQPRFAFMT KSDVDHLEDG YRWRKYGQKA VKNSPFPRSY FRCTNSRCTV KKRVERSSED
201: PSIVITTYEG QHCHQTTGFP RGGILTAHDP SNFTSHHLLP PPLPDPYYYQ ELLYQLHRDN TSTYQKKRDN TSSLRLPQST TEGPAAVSSI NPPEEGLLGD
301: IVPQTMRNT
101: TSNDLPATSS STEDPTENST ASAAKAPETP KNEKKKAQKR IRQPRFAFMT KSDVDHLEDG YRWRKYGQKA VKNSPFPRSY FRCTNSRCTV KKRVERSSED
201: PSIVITTYEG QHCHQTTGFP RGGILTAHDP SNFTSHHLLP PPLPDPYYYQ ELLYQLHRDN TSTYQKKRDN TSSLRLPQST TEGPAAVSSI NPPEEGLLGD
301: IVPQTMRNT
001: MNDPDNPDLS NDDSAWRELT LTAQDSDFFD RDTSNILSDF GWNLHHSSDH PHSLRFDSDL TQTTGVKPTT VTSSCSSSAA VSVAVTSTNN NPSATSSSSE
101: DPAENSTASA EKTPPPETPV KEKKKAQKRI RQPRFAFMTK SDVDNLEDGY RWRKYGQKAV KNSPFPRSYY RCTNSRCTVK KRVERSSDDP SIVITTYEGQ
201: HCHQTIGFPR GGILTAHDPH SFTSHHHLPP PLPNPYYYQE LLHQLHRDNN APSPRLPRPT TEDTPAVSTP SEEGLLGDIV PQTMRNP
101: DPAENSTASA EKTPPPETPV KEKKKAQKRI RQPRFAFMTK SDVDNLEDGY RWRKYGQKAV KNSPFPRSYY RCTNSRCTVK KRVERSSDDP SIVITTYEGQ
201: HCHQTIGFPR GGILTAHDPH SFTSHHHLPP PLPNPYYYQE LLHQLHRDNN APSPRLPRPT TEDTPAVSTP SEEGLLGDIV PQTMRNP
Arabidopsis Description
WRKY57At1g69310 [Source:UniProtKB/TrEMBL;Acc:Q147N6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.