Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G13080.1 | CDY04768 | AT1G22920.1 | 21798944 |
| AT5G13080.1 | CDY21400 | AT1G22920.1 | 21798944 |
| AT5G13080.1 | CDY25761 | AT1G22920.1 | 21798944 |
| AT5G13080.1 | CDX95531 | AT3G18360.1 | 21798944 |
| AT5G13080.1 | CDY18516 | AT3G18360.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69672 | Canola | nucleus | 97.28 | 97.28 |
| AT5G13080.1 | Thale cress | nucleus, plastid | 87.07 | 88.28 |
| CDX70492 | Canola | nucleus | 87.07 | 87.07 |
| CDX78504 | Canola | nucleus | 86.39 | 86.39 |
| GSMUA_Achr9P07230_001 | Banana | mitochondrion | 48.3 | 61.74 |
| Solyc05g015850.2.1 | Tomato | nucleus | 68.03 | 58.14 |
| PGSC0003DMT400056352 | Potato | nucleus | 68.03 | 58.14 |
| CDX77096 | Canola | nucleus | 51.02 | 52.08 |
| KRG94564 | Soybean | nucleus | 60.54 | 47.34 |
| VIT_14s0068g01770.t01 | Wine grape | nucleus | 57.14 | 46.15 |
| VIT_01s0010g03930.t01 | Wine grape | nucleus, plastid | 59.18 | 46.03 |
| CDY72079 | Canola | nucleus | 33.33 | 44.14 |
| CDY39732 | Canola | nucleus | 45.58 | 38.07 |
| CDY44466 | Canola | nucleus | 45.58 | 38.07 |
| CDY25554 | Canola | nucleus | 46.26 | 36.17 |
| CDY38208 | Canola | nucleus | 45.58 | 36.02 |
| CDY34393 | Canola | nucleus | 46.26 | 35.79 |
| CDY55479 | Canola | nucleus | 44.9 | 35.48 |
| CDY24990 | Canola | nucleus | 33.33 | 28.99 |
| CDY05537 | Canola | nucleus | 32.65 | 28.57 |
| CDX87064 | Canola | nucleus | 32.65 | 28.07 |
| CDY48151 | Canola | nucleus | 31.97 | 27.49 |
| CDX88219 | Canola | nucleus | 32.65 | 27.27 |
| CDY52627 | Canola | nucleus | 31.97 | 26.7 |
| CDY18694 | Canola | nucleus | 31.29 | 26.59 |
| CDX83415 | Canola | nucleus, plastid | 32.65 | 25.53 |
| CDX95615 | Canola | nucleus, plastid | 32.65 | 25.26 |
| CDX81259 | Canola | nucleus | 31.97 | 23.62 |
| CDY71963 | Canola | nucleus | 34.01 | 23.36 |
| CDY48258 | Canola | nucleus | 34.01 | 23.26 |
| CDY31301 | Canola | nucleus | 29.93 | 22.34 |
| CDY30483 | Canola | nucleus | 33.33 | 22.27 |
| CDY23453 | Canola | nucleus | 32.65 | 22.02 |
| CDY14512 | Canola | nucleus | 29.93 | 21.36 |
| CDY08849 | Canola | nucleus | 29.93 | 21.36 |
| CDY04276 | Canola | nucleus | 39.46 | 20.21 |
| CDY07352 | Canola | nucleus | 39.46 | 20.07 |
| CDY43194 | Canola | nucleus | 36.73 | 19.49 |
| CDY08894 | Canola | nucleus | 37.41 | 18.71 |
| CDX95947 | Canola | nucleus | 37.41 | 18.71 |
| CDY26310 | Canola | nucleus | 34.69 | 18.68 |
| CDX98155 | Canola | nucleus | 36.05 | 18.66 |
| CDY54139 | Canola | nucleus | 37.41 | 18.46 |
| CDX72701 | Canola | nucleus | 35.37 | 18.44 |
| CDY40910 | Canola | nucleus | 36.73 | 18.37 |
| CDX99859 | Canola | nucleus | 34.01 | 18.32 |
| CDY37794 | Canola | nucleus | 38.78 | 18.21 |
| CDX78832 | Canola | nucleus | 38.1 | 18.18 |
| CDY11416 | Canola | nucleus | 36.73 | 18.12 |
| CDX80094 | Canola | nucleus | 38.78 | 18.04 |
| CDX76541 | Canola | nucleus | 36.05 | 18.03 |
| CDY72613 | Canola | nucleus | 39.46 | 17.96 |
| CDY53184 | Canola | nucleus | 35.37 | 17.75 |
| CDX99495 | Canola | nucleus | 37.41 | 17.63 |
| CDY12144 | Canola | nucleus | 35.37 | 17.63 |
| CDX76630 | Canola | nucleus | 35.37 | 17.51 |
| CDY50313 | Canola | nucleus | 36.73 | 17.48 |
| CDY01523 | Canola | nucleus | 36.73 | 17.31 |
| CDY51420 | Canola | nucleus | 38.1 | 17.28 |
| CDY09083 | Canola | nucleus | 36.73 | 17.25 |
| CDX90417 | Canola | nucleus | 36.73 | 17.25 |
| CDY41978 | Canola | nucleus | 34.69 | 17.11 |
| CDY27500 | Canola | nucleus | 38.1 | 16.82 |
| CDY43969 | Canola | nucleus | 35.37 | 16.4 |
| CDX77655 | Canola | nucleus | 35.37 | 16.1 |
| CDY05620 | Canola | nucleus | 42.18 | 15.86 |
| CDY33471 | Canola | nucleus | 34.69 | 15.79 |
| CDX87722 | Canola | nucleus | 33.33 | 15.65 |
| CDY03224 | Canola | nucleus | 34.01 | 15.58 |
| CDY35159 | Canola | nucleus | 34.01 | 15.58 |
| CDX85413 | Canola | nucleus | 42.18 | 15.54 |
| CDY46824 | Canola | nucleus | 29.25 | 14.83 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078ECZ2 | EnsemblPlants:CDX97223 | ProteinID:CDX97223 | ProteinID:CDX97223.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00104225001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF25 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EF0AFD | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaC09g44020D
Coordinates
chrLK031897:-:1265324..1266334
Molecular Weight (calculated)
17045.0 Da
IEP (calculated)
9.869
GRAVY (calculated)
-1.046
Length
147 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGYDDGSLY APFLSLKPHQ SLSKSELEQG REEASKVSEG SSRSRDLKKK KGKKQKFAFQ TRSQVDILDD GYRWRKYGQK AVKNNKFPRS YYRCTYGGCN
101: VKKQVQRLTS DQEVVVTTYE GVHSHPIEKS TENFEHILTQ MQIYSSF
101: VKKQVQRLTS DQEVVVTTYE GVHSHPIEKS TENFEHILTQ MQIYSSF
001: MEGYDNGSLY APFLSLKSHS KPELHQGEEE SSKVRSEGCS KSVESSKKKG KKQRYAFQTR SQVDILDDGY RWRKYGQKAV KNNKFPRSYY RCTYGGCNVK
101: KQVQRLTVDQ EVVVTTYEGV HSHPIEKSTE NFEHILTQMQ IYSSF
101: KQVQRLTVDQ EVVVTTYEGV HSHPIEKSTE NFEHILTQMQ IYSSF
Arabidopsis Description
WRKY75WRKY75 [Source:UniProtKB/TrEMBL;Acc:A0A178UJF4]
SUBAcon: [nucleus,plastid]
SUBAcon: [nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.