Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004370.1-P | Field mustard | nucleus | 96.6 | 96.6 |
| CDX95947 | Canola | nucleus | 96.6 | 96.6 |
| AT1G69310.2 | Thale cress | nucleus | 77.89 | 79.79 |
| CDY54139 | Canola | nucleus | 79.93 | 78.86 |
| CDY04276 | Canola | nucleus | 75.85 | 77.7 |
| CDY07352 | Canola | nucleus | 75.85 | 77.16 |
| CDY50313 | Canola | nucleus | 77.89 | 74.11 |
| CDY72079 | Canola | nucleus | 19.39 | 51.35 |
| KRH70870 | Soybean | nucleus | 48.64 | 48.81 |
| KRH75010 | Soybean | nucleus | 48.64 | 48.15 |
| VIT_01s0011g00720.t01 | Wine grape | nucleus | 48.64 | 46.89 |
| Os03t0758000-01 | Rice | nucleus, plastid | 32.31 | 41.13 |
| CDX77096 | Canola | nucleus | 19.73 | 40.28 |
| GSMUA_Achr4P23360_001 | Banana | nucleus | 35.71 | 40.08 |
| Os07t0111400-00 | Rice | nucleus | 38.78 | 39.31 |
| PGSC0003DMT400072958 | Potato | mitochondrion, nucleus | 43.2 | 38.96 |
| Solyc05g012500.2.1 | Tomato | nucleus | 42.86 | 38.53 |
| HORVU0Hr1G003340.1 | Barley | nucleus | 36.73 | 37.89 |
| TraesCS2B01G280300.1 | Wheat | nucleus | 36.39 | 37.54 |
| CDX70492 | Canola | nucleus | 18.37 | 36.73 |
| CDX97223 | Canola | nucleus | 18.37 | 36.73 |
| CDX69672 | Canola | nucleus | 18.37 | 36.73 |
| CDX78504 | Canola | nucleus | 18.37 | 36.73 |
| TraesCS2A01G261900.1 | Wheat | nucleus | 35.71 | 36.71 |
| TraesCS2D01G262100.1 | Wheat | nucleus | 35.37 | 36.49 |
| KXG34273 | Sorghum | mitochondrion | 33.67 | 36.4 |
| TraesCS5B01G399900.1 | Wheat | nucleus | 38.1 | 36.01 |
| TraesCS5D01G404400.1 | Wheat | nucleus | 37.76 | 35.81 |
| TraesCS5A01G395100.1 | Wheat | nucleus | 37.07 | 35.16 |
| EER90854 | Sorghum | nucleus | 38.1 | 33.84 |
| HORVU5Hr1G096420.20 | Barley | mitochondrion, nucleus | 34.69 | 33.77 |
| Zm00001d018656_P001 | Maize | nucleus | 37.41 | 33.13 |
| CDX83415 | Canola | nucleus, plastid | 21.09 | 32.98 |
| CDX95615 | Canola | nucleus, plastid | 21.09 | 32.63 |
| Zm00001d034073_P001 | Maize | nucleus | 36.05 | 32.02 |
| CDY05537 | Canola | nucleus | 18.03 | 31.55 |
| CDY24990 | Canola | nucleus | 18.03 | 31.36 |
| CDY44466 | Canola | nucleus | 18.71 | 31.25 |
| CDY39732 | Canola | nucleus | 18.71 | 31.25 |
| CDY71963 | Canola | nucleus | 22.11 | 30.37 |
| CDY48258 | Canola | nucleus | 22.11 | 30.23 |
| CDY37794 | Canola | nucleus | 31.97 | 30.03 |
| CDY43194 | Canola | nucleus | 28.23 | 29.96 |
| CDX98155 | Canola | nucleus | 28.91 | 29.93 |
| CDX87064 | Canola | nucleus | 17.35 | 29.82 |
| CDX80094 | Canola | nucleus | 31.97 | 29.75 |
| CDX99859 | Canola | nucleus | 27.55 | 29.67 |
| CDY26310 | Canola | nucleus | 27.55 | 29.67 |
| CDX76541 | Canola | nucleus | 29.59 | 29.59 |
| CDX88219 | Canola | nucleus | 17.69 | 29.55 |
| CDY51420 | Canola | nucleus | 32.31 | 29.32 |
| CDY48151 | Canola | nucleus | 17.01 | 29.24 |
| CDY30483 | Canola | nucleus | 21.77 | 29.09 |
| CDY52627 | Canola | nucleus | 17.35 | 28.98 |
| CDY08894 | Canola | nucleus | 28.91 | 28.91 |
| CDY23453 | Canola | nucleus | 21.43 | 28.9 |
| CDY27500 | Canola | nucleus | 32.31 | 28.53 |
| CDY72613 | Canola | nucleus | 31.29 | 28.48 |
| CDY55479 | Canola | nucleus | 17.69 | 27.96 |
| CDY34393 | Canola | nucleus | 18.03 | 27.89 |
| CDY18694 | Canola | nucleus | 16.33 | 27.75 |
| CDY25554 | Canola | nucleus | 17.69 | 27.66 |
| CDY01523 | Canola | nucleus | 29.25 | 27.56 |
| CDY09083 | Canola | nucleus | 29.25 | 27.48 |
| CDX90417 | Canola | nucleus | 29.25 | 27.48 |
| CDY38208 | Canola | nucleus | 17.35 | 27.42 |
| CDY11416 | Canola | nucleus | 27.55 | 27.18 |
| CDX78832 | Canola | nucleus | 28.23 | 26.95 |
| CDX99495 | Canola | nucleus | 28.23 | 26.6 |
| CDX76630 | Canola | nucleus | 26.53 | 26.26 |
| CDY05620 | Canola | nucleus | 34.35 | 25.83 |
| CDY14512 | Canola | nucleus | 18.03 | 25.73 |
| CDY08849 | Canola | nucleus | 18.03 | 25.73 |
| CDY33471 | Canola | nucleus | 28.23 | 25.7 |
| CDX81259 | Canola | nucleus | 17.35 | 25.63 |
| CDY03224 | Canola | nucleus | 27.89 | 25.55 |
| CDX77655 | Canola | nucleus | 27.89 | 25.39 |
| CDY43969 | Canola | nucleus | 27.21 | 25.24 |
| CDY35159 | Canola | nucleus | 27.55 | 25.23 |
| CDX85413 | Canola | nucleus | 33.33 | 24.56 |
| CDY53184 | Canola | nucleus | 23.81 | 23.89 |
| CDX72701 | Canola | nucleus | 22.45 | 23.4 |
| CDY31301 | Canola | nucleus | 15.65 | 23.35 |
| CDY12144 | Canola | nucleus | 23.13 | 23.05 |
| CDX87722 | Canola | nucleus | 23.81 | 22.36 |
| CDY41978 | Canola | nucleus | 22.45 | 22.15 |
| CDY46824 | Canola | nucleus | 15.65 | 15.86 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078HQM0 | UniProt:A0A078HQM0 | EnsemblPlants:CDY40910 | ProteinID:CDY40910 |
| ProteinID:CDY40910.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00071959001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF77 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EC0FBE | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaC06g30480DBnaC06g30480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HQM0]
Coordinates
chrLK032484:-:73514..75295
Molecular Weight (calculated)
32600.3 Da
IEP (calculated)
6.647
GRAVY (calculated)
-0.916
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MTDPEDPDLS NEDSAWRQLT APDSVFFDRD TSNILSDFGW NLHASSSDNH HNLRFDPCLP PTSTVPSPVT TTSTPDPIPA SSRSSTVAAA AASVVSTSNN
101: PSATSSSSED PTDNSTPKTP ETPKKEKKQA QKRIRQPRFA FMTKSDVDNL EDGYRWRKYG QKAVKNSPFP RSYYRCTNSR CTVKKRVERS SEDPSIVITT
201: YEGQHCHQTI GFPRGGILTA HDPHNFTSHH HNLPLPLPNP YYYEDLHQLH RDSTSSPRLL PQSTTEDGPA AVSSINPSEE GLLGDIVPQT MRNP
101: PSATSSSSED PTDNSTPKTP ETPKKEKKQA QKRIRQPRFA FMTKSDVDNL EDGYRWRKYG QKAVKNSPFP RSYYRCTNSR CTVKKRVERS SEDPSIVITT
201: YEGQHCHQTI GFPRGGILTA HDPHNFTSHH HNLPLPLPNP YYYEDLHQLH RDSTSSPRLL PQSTTEDGPA AVSSINPSEE GLLGDIVPQT MRNP
001: MNDPDNPDLS NDDSAWRELT LTAQDSDFFD RDTSNILSDF GWNLHHSSDH PHSLRFDSDL TQTTGVKPTT VTSSCSSSAA VSVAVTSTNN NPSATSSSSE
101: DPAENSTASA EKTPPPETPV KEKKKAQKRI RQPRFAFMTK SDVDNLEDGY RWRKYGQKAV KNSPFPRSYY RCTNSRCTVK KRVERSSDDP SIVITTYEGQ
201: HCHQTIGFPR GGILTAHDPH SFTSHHHLPP PLPNPYYYQE LLHQLHRDNN APSPRLPRPT TEDTPAVSTP SEEGLLGDIV PQTMRNP
101: DPAENSTASA EKTPPPETPV KEKKKAQKRI RQPRFAFMTK SDVDNLEDGY RWRKYGQKAV KNSPFPRSYY RCTNSRCTVK KRVERSSDDP SIVITTYEGQ
201: HCHQTIGFPR GGILTAHDPH SFTSHHHLPP PLPNPYYYQE LLHQLHRDNN APSPRLPRPT TEDTPAVSTP SEEGLLGDIV PQTMRNP
Arabidopsis Description
WRKY57At1g69310 [Source:UniProtKB/TrEMBL;Acc:Q147N6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.