Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004002.1-P | Field mustard | nucleus | 98.96 | 98.96 |
| CDY04276 | Canola | nucleus | 95.5 | 96.17 |
| CDY54139 | Canola | nucleus | 80.28 | 77.85 |
| AT1G69310.2 | Thale cress | nucleus | 77.16 | 77.7 |
| CDX95947 | Canola | nucleus | 77.85 | 76.53 |
| CDY40910 | Canola | nucleus | 77.16 | 75.85 |
| CDY50313 | Canola | nucleus | 78.55 | 73.46 |
| CDY72079 | Canola | nucleus | 19.72 | 51.35 |
| KRH75010 | Soybean | nucleus | 51.56 | 50.17 |
| KRH70870 | Soybean | nucleus | 50.52 | 49.83 |
| VIT_01s0011g00720.t01 | Wine grape | nucleus | 51.9 | 49.18 |
| CDX77096 | Canola | nucleus | 20.07 | 40.28 |
| CDX78504 | Canola | nucleus | 20.07 | 39.46 |
| CDX70492 | Canola | nucleus | 20.07 | 39.46 |
| CDX69672 | Canola | nucleus | 20.07 | 39.46 |
| CDX97223 | Canola | nucleus | 20.07 | 39.46 |
| Os03t0758000-01 | Rice | nucleus, plastid | 31.49 | 39.39 |
| Os07t0111400-00 | Rice | nucleus | 39.1 | 38.97 |
| GSMUA_Achr4P23360_001 | Banana | nucleus | 35.29 | 38.93 |
| PGSC0003DMT400072958 | Potato | mitochondrion, nucleus | 43.6 | 38.65 |
| Solyc05g012500.2.1 | Tomato | nucleus | 43.6 | 38.53 |
| TraesCS2B01G280300.1 | Wheat | nucleus | 37.37 | 37.89 |
| HORVU0Hr1G003340.1 | Barley | nucleus | 37.02 | 37.54 |
| TraesCS2A01G261900.1 | Wheat | nucleus | 36.33 | 36.71 |
| TraesCS2D01G262100.1 | Wheat | nucleus | 35.99 | 36.49 |
| KXG34273 | Sorghum | mitochondrion | 34.26 | 36.4 |
| TraesCS5B01G399900.1 | Wheat | nucleus | 38.06 | 35.37 |
| TraesCS5D01G404400.1 | Wheat | nucleus | 37.72 | 35.16 |
| TraesCS5A01G395100.1 | Wheat | nucleus | 37.72 | 35.16 |
| HORVU5Hr1G096420.20 | Barley | mitochondrion, nucleus | 35.29 | 33.77 |
| Zm00001d018656_P001 | Maize | nucleus | 38.75 | 33.73 |
| EER90854 | Sorghum | nucleus | 38.41 | 33.53 |
| CDY05537 | Canola | nucleus | 19.03 | 32.74 |
| CDY24990 | Canola | nucleus | 18.69 | 31.95 |
| CDX83415 | Canola | nucleus, plastid | 20.76 | 31.91 |
| CDX95615 | Canola | nucleus, plastid | 20.76 | 31.58 |
| Zm00001d034073_P001 | Maize | nucleus | 35.99 | 31.42 |
| CDY44466 | Canola | nucleus | 18.69 | 30.68 |
| CDY39732 | Canola | nucleus | 18.69 | 30.68 |
| CDX87064 | Canola | nucleus | 17.99 | 30.41 |
| CDY52627 | Canola | nucleus | 18.34 | 30.11 |
| CDX88219 | Canola | nucleus | 18.34 | 30.11 |
| CDY48151 | Canola | nucleus | 17.65 | 29.82 |
| CDY48258 | Canola | nucleus | 22.15 | 29.77 |
| CDY43194 | Canola | nucleus | 28.37 | 29.6 |
| CDY71963 | Canola | nucleus | 21.8 | 29.44 |
| CDY26310 | Canola | nucleus | 27.68 | 29.3 |
| CDX98155 | Canola | nucleus | 28.72 | 29.23 |
| CDX99859 | Canola | nucleus | 27.34 | 28.94 |
| CDY37794 | Canola | nucleus | 31.14 | 28.75 |
| CDY72613 | Canola | nucleus | 31.83 | 28.48 |
| CDX80094 | Canola | nucleus | 31.14 | 28.48 |
| CDX76541 | Canola | nucleus | 28.72 | 28.23 |
| CDY23453 | Canola | nucleus | 21.11 | 27.98 |
| CDY38208 | Canola | nucleus | 17.99 | 27.96 |
| CDY55479 | Canola | nucleus | 17.99 | 27.96 |
| CDY34393 | Canola | nucleus | 18.34 | 27.89 |
| CDY51420 | Canola | nucleus | 31.14 | 27.78 |
| CDY30483 | Canola | nucleus | 21.11 | 27.73 |
| CDY25554 | Canola | nucleus | 17.99 | 27.66 |
| CDY08894 | Canola | nucleus | 28.03 | 27.55 |
| CDY18694 | Canola | nucleus | 16.26 | 27.17 |
| CDY27500 | Canola | nucleus | 31.14 | 27.03 |
| CDX78832 | Canola | nucleus | 28.03 | 26.3 |
| CDX99495 | Canola | nucleus | 28.03 | 25.96 |
| CDY01523 | Canola | nucleus | 28.03 | 25.96 |
| CDX90417 | Canola | nucleus | 28.03 | 25.88 |
| CDY09083 | Canola | nucleus | 28.03 | 25.88 |
| CDY05620 | Canola | nucleus | 34.95 | 25.83 |
| CDY14512 | Canola | nucleus | 18.34 | 25.73 |
| CDY08849 | Canola | nucleus | 18.34 | 25.73 |
| CDY11416 | Canola | nucleus | 26.3 | 25.5 |
| CDX76630 | Canola | nucleus | 25.95 | 25.25 |
| CDX81259 | Canola | nucleus | 17.3 | 25.13 |
| CDY33471 | Canola | nucleus | 27.68 | 24.77 |
| CDX77655 | Canola | nucleus | 27.68 | 24.77 |
| CDX85413 | Canola | nucleus | 33.56 | 24.31 |
| CDY03224 | Canola | nucleus | 26.99 | 24.3 |
| CDY43969 | Canola | nucleus | 26.64 | 24.29 |
| CDY35159 | Canola | nucleus | 26.64 | 23.99 |
| CDX87722 | Canola | nucleus | 24.91 | 23.0 |
| CDY31301 | Canola | nucleus | 15.57 | 22.84 |
| CDY53184 | Canola | nucleus | 22.84 | 22.53 |
| CDX72701 | Canola | nucleus | 21.45 | 21.99 |
| CDY12144 | Canola | nucleus | 22.15 | 21.69 |
| CDY41978 | Canola | nucleus | 22.15 | 21.48 |
| CDY46824 | Canola | nucleus | 15.92 | 15.86 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078F2N3 | UniProt:A0A078F2N3 | EnsemblPlants:CDY07352 | ProteinID:CDY07352 |
| ProteinID:CDY07352.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00124312001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF77 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EE0550 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaA07g24310DBnaA07g24310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F2N3]
Coordinates
chrLK031978:+:128105..130055
Molecular Weight (calculated)
32047.6 Da
IEP (calculated)
6.742
GRAVY (calculated)
-0.866
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDPKDPDLS DDSAWRELTA SDSDFFYRDT STILSEFAWN LHASSSFTQT AGVPSSITTT TSKTDQPIPT SSGSSSAAAS VTVTEVSTNI NNPSTATSSS
101: SEDPTENSTA SAAKTPETPK KEKKKAQKRI RQQRFAFMTK SDVDNLEDGY RWRKYGQKAV KNSSFPRSYY RCTNSRCTVK KRVERSSEDP SIVITTYEGQ
201: HCHQTVGFPR GGIFPAHDPH NFTSHHHLPP PLLNPYYYQE LLHQLHSENT SSLQLPQSTT EDGHVAVSSI NQPEEGLLGD IVPQTMRNP
101: SEDPTENSTA SAAKTPETPK KEKKKAQKRI RQQRFAFMTK SDVDNLEDGY RWRKYGQKAV KNSSFPRSYY RCTNSRCTVK KRVERSSEDP SIVITTYEGQ
201: HCHQTVGFPR GGIFPAHDPH NFTSHHHLPP PLLNPYYYQE LLHQLHSENT SSLQLPQSTT EDGHVAVSSI NQPEEGLLGD IVPQTMRNP
001: MNDPDNPDLS NDDSAWRELT LTAQDSDFFD RDTSNILSDF GWNLHHSSDH PHSLRFDSDL TQTTGVKPTT VTSSCSSSAA VSVAVTSTNN NPSATSSSSE
101: DPAENSTASA EKTPPPETPV KEKKKAQKRI RQPRFAFMTK SDVDNLEDGY RWRKYGQKAV KNSPFPRSYY RCTNSRCTVK KRVERSSDDP SIVITTYEGQ
201: HCHQTIGFPR GGILTAHDPH SFTSHHHLPP PLPNPYYYQE LLHQLHRDNN APSPRLPRPT TEDTPAVSTP SEEGLLGDIV PQTMRNP
101: DPAENSTASA EKTPPPETPV KEKKKAQKRI RQPRFAFMTK SDVDNLEDGY RWRKYGQKAV KNSPFPRSYY RCTNSRCTVK KRVERSSDDP SIVITTYEGQ
201: HCHQTIGFPR GGILTAHDPH SFTSHHHLPP PLPNPYYYQE LLHQLHRDNN APSPRLPRPT TEDTPAVSTP SEEGLLGDIV PQTMRNP
Arabidopsis Description
WRKY57At1g69310 [Source:UniProtKB/TrEMBL;Acc:Q147N6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.