Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G399900.1 | Wheat | nucleus | 75.17 | 72.99 |
| TraesCS5A01G395100.1 | Wheat | nucleus | 73.51 | 71.61 |
| TraesCS5D01G404400.1 | Wheat | nucleus | 71.85 | 70.0 |
| Os03t0758000-01 | Rice | nucleus, plastid | 48.68 | 63.64 |
| EER90854 | Sorghum | nucleus | 52.32 | 47.73 |
| Zm00001d034073_P001 | Maize | nucleus | 50.99 | 46.53 |
| KRH70870 | Soybean | nucleus | 37.42 | 38.57 |
| GSMUA_Achr4P23360_001 | Banana | nucleus | 33.11 | 38.17 |
| KRH75010 | Soybean | nucleus | 37.42 | 38.05 |
| HORVU0Hr1G003340.1 | Barley | nucleus | 35.43 | 37.54 |
| CDY04276 | Canola | nucleus | 34.11 | 35.89 |
| CDY07352 | Canola | nucleus | 33.77 | 35.29 |
| AT1G69310.2 | Thale cress | nucleus | 33.44 | 35.19 |
| VIT_01s0011g00720.t01 | Wine grape | nucleus | 35.43 | 35.08 |
| CDY40910 | Canola | nucleus | 33.77 | 34.69 |
| Bra004002.1-P | Field mustard | nucleus | 33.11 | 34.6 |
| Bra004370.1-P | Field mustard | nucleus | 33.44 | 34.35 |
| CDX95947 | Canola | nucleus | 33.44 | 34.35 |
| CDY54139 | Canola | nucleus | 33.77 | 34.23 |
| Bra038313.1-P | Field mustard | nucleus | 33.44 | 33.78 |
| CDY50313 | Canola | nucleus | 33.77 | 33.01 |
| PGSC0003DMT400072958 | Potato | mitochondrion, nucleus | 34.77 | 32.21 |
| Solyc05g012500.2.1 | Tomato | nucleus | 34.77 | 32.11 |
| HORVU1Hr1G088300.1 | Barley | nucleus | 29.8 | 31.25 |
| HORVU2Hr1G001780.1 | Barley | nucleus | 18.87 | 29.08 |
| HORVU3Hr1G060500.1 | Barley | nucleus | 32.12 | 26.65 |
| HORVU2Hr1G093350.3 | Barley | nucleus | 20.2 | 26.52 |
| HORVU1Hr1G092130.1 | Barley | nucleus | 26.16 | 25.57 |
| HORVU3Hr1G069660.1 | Barley | nucleus | 18.87 | 24.68 |
| HORVU1Hr1G027700.1 | Barley | nucleus | 15.89 | 24.12 |
| HORVU6Hr1G061940.1 | Barley | nucleus | 17.88 | 23.79 |
| HORVU0Hr1G001430.1 | Barley | plastid | 16.56 | 22.94 |
| HORVU3Hr1G067510.1 | Barley | mitochondrion, plastid | 15.89 | 22.64 |
| HORVU3Hr1G021120.1 | Barley | nucleus, plastid | 18.87 | 21.59 |
| HORVU1Hr1G081570.1 | Barley | plastid | 21.52 | 21.24 |
| HORVU3Hr1G050590.3 | Barley | nucleus | 18.54 | 21.05 |
| HORVU1Hr1G080300.1 | Barley | nucleus | 17.55 | 19.0 |
| HORVU3Hr1G020140.1 | Barley | mitochondrion | 15.23 | 18.7 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:A0A287SE92 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:HORVU5Hr1G096420 | EnsemblPlants:HORVU5Hr1G096420.20 | InterPro:IPR003657 | InterPro:IPR036576 |
| PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF77 | SMART:SM00774 | SUPFAM:SSF118290 |
| UniParc:UPI000B47780F | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr5H:-:601272072..601274219
Molecular Weight (calculated)
31617.5 Da
IEP (calculated)
11.737
GRAVY (calculated)
-0.665
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: GRRRGREAGG GGRRRGLAAV RRRRLRGVLL LGVRGAGRMA GRPRRGHRGA AVAGSAGGQR VRFGPAGAAG RDAAXXXXXG DGAPAAATEN ADRPQSAADA
101: ASMKPAAATA TKKGQKRARQ QRFAFVTKSE VDHLEDGYRW RKYGQKAVKN SPFPRSYYRC TNSKCTVKKR VERSSEDPTV VITTYEGQHC HHQTSFQRGG
201: GMHFHGAATV ALAEQMSFVP TQQLYNLPPL RRLQMNPGSS ESAVSSMPPS LQQLNGGDDL GRSTSYSPTA SAVQTPSSLV PPDVSFDMGL LGDIVPPGVR
301: NG
101: ASMKPAAATA TKKGQKRARQ QRFAFVTKSE VDHLEDGYRW RKYGQKAVKN SPFPRSYYRC TNSKCTVKKR VERSSEDPTV VITTYEGQHC HHQTSFQRGG
201: GMHFHGAATV ALAEQMSFVP TQQLYNLPPL RRLQMNPGSS ESAVSSMPPS LQQLNGGDDL GRSTSYSPTA SAVQTPSSLV PPDVSFDMGL LGDIVPPGVR
301: NG
001: MNDPDNPDLS NDDSAWRELT LTAQDSDFFD RDTSNILSDF GWNLHHSSDH PHSLRFDSDL TQTTGVKPTT VTSSCSSSAA VSVAVTSTNN NPSATSSSSE
101: DPAENSTASA EKTPPPETPV KEKKKAQKRI RQPRFAFMTK SDVDNLEDGY RWRKYGQKAV KNSPFPRSYY RCTNSRCTVK KRVERSSDDP SIVITTYEGQ
201: HCHQTIGFPR GGILTAHDPH SFTSHHHLPP PLPNPYYYQE LLHQLHRDNN APSPRLPRPT TEDTPAVSTP SEEGLLGDIV PQTMRNP
101: DPAENSTASA EKTPPPETPV KEKKKAQKRI RQPRFAFMTK SDVDNLEDGY RWRKYGQKAV KNSPFPRSYY RCTNSRCTVK KRVERSSDDP SIVITTYEGQ
201: HCHQTIGFPR GGILTAHDPH SFTSHHHLPP PLPNPYYYQE LLHQLHRDNN APSPRLPRPT TEDTPAVSTP SEEGLLGDIV PQTMRNP
Arabidopsis Description
WRKY57At1g69310 [Source:UniProtKB/TrEMBL;Acc:Q147N6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.