Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G242000.1 | Wheat | nucleus | 91.63 | 88.14 |
| TraesCS6D01G223900.1 | Wheat | cytosol | 91.19 | 87.71 |
| TraesCS6B01G282500.1 | Wheat | nucleus | 91.19 | 87.71 |
| GSMUA_Achr4P17890_001 | Banana | nucleus | 40.53 | 82.14 |
| Zm00001d051328_P002 | Maize | nucleus | 69.6 | 67.23 |
| Zm00001d017444_P001 | Maize | extracellular, vacuole | 67.84 | 66.67 |
| KXG31104 | Sorghum | nucleus | 69.6 | 66.39 |
| HORVU2Hr1G093350.3 | Barley | nucleus | 54.63 | 53.91 |
| CDX83415 | Canola | nucleus, plastid | 42.73 | 51.6 |
| CDX95615 | Canola | nucleus, plastid | 42.73 | 51.05 |
| Bra000362.1-P | Field mustard | nucleus | 44.05 | 47.62 |
| KRH48843 | Soybean | nucleus | 48.46 | 46.41 |
| CDY30483 | Canola | nucleus | 44.93 | 46.36 |
| CDY23453 | Canola | nucleus | 44.49 | 46.33 |
| AT2G44745.1 | Thale cress | nucleus | 44.49 | 46.33 |
| CDY71963 | Canola | nucleus | 43.61 | 46.26 |
| KRH66475 | Soybean | nucleus | 48.46 | 46.22 |
| Bra004864.1-P | Field mustard | nucleus | 43.61 | 46.05 |
| KRH40189 | Soybean | nucleus | 48.02 | 45.8 |
| CDY48258 | Canola | nucleus | 43.17 | 45.58 |
| Solyc01g089960.2.1 | Tomato | nucleus | 44.93 | 43.22 |
| PGSC0003DMT400080069 | Potato | nucleus | 45.81 | 41.43 |
| HORVU2Hr1G001780.1 | Barley | nucleus | 27.75 | 32.14 |
| HORVU3Hr1G021120.1 | Barley | nucleus, plastid | 34.36 | 29.55 |
| HORVU3Hr1G069660.1 | Barley | nucleus | 27.75 | 27.27 |
| HORVU1Hr1G027700.1 | Barley | nucleus | 22.03 | 25.13 |
| HORVU0Hr1G001430.1 | Barley | plastid | 22.91 | 23.85 |
| HORVU3Hr1G067510.1 | Barley | mitochondrion, plastid | 22.03 | 23.58 |
| HORVU0Hr1G003340.1 | Barley | nucleus | 26.87 | 21.4 |
| HORVU1Hr1G092130.1 | Barley | nucleus | 29.07 | 21.36 |
| HORVU3Hr1G050590.3 | Barley | nucleus | 23.35 | 19.92 |
| HORVU3Hr1G020140.1 | Barley | mitochondrion | 21.59 | 19.92 |
| HORVU1Hr1G081570.1 | Barley | plastid | 25.55 | 18.95 |
| HORVU1Hr1G080300.1 | Barley | nucleus | 22.91 | 18.64 |
| HORVU1Hr1G088300.1 | Barley | nucleus | 23.35 | 18.4 |
| HORVU5Hr1G096420.20 | Barley | mitochondrion, nucleus | 23.79 | 17.88 |
| HORVU3Hr1G060500.1 | Barley | nucleus | 28.63 | 17.86 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:A0A287UED9 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:HORVU6Hr1G061940 | EnsemblPlants:HORVU6Hr1G061940.1 | InterPro:IPR003657 | InterPro:IPR036576 |
| PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF17 | SMART:SM00774 | SUPFAM:SSF118290 |
| UniParc:UPI000B479624 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr6H:-:414351834..414354927
Molecular Weight (calculated)
25319.1 Da
IEP (calculated)
8.832
GRAVY (calculated)
-0.574
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: MHTCMDHGSQ LGMAYCLPNL SVPDHYYTTP VPLSPLQLPS HSKPLQMPLD HEEAVMLSSD HCGLYPLPAL PFGHGHSGAV VSKKPAVGFI PNIGADQVGT
101: STVTARVGYE GATACNTWWR ASTAGEKGKM KVRRKMREPR FCFQTRSDVD VLDDGYKWRK YGQKVVKNSL HPRSYFRCTH SNCRVKKRVE RLSTDCRMVI
201: TTYEGRHTHP PCDDNSSSSG DNTTTCF
101: STVTARVGYE GATACNTWWR ASTAGEKGKM KVRRKMREPR FCFQTRSDVD VLDDGYKWRK YGQKVVKNSL HPRSYFRCTH SNCRVKKRVE RLSTDCRMVI
201: TTYEGRHTHP PCDDNSSSSG DNTTTCF
001: MEGGGRRVFS NYDLQQVTSS STTIQENMNF LVPFEETNVL TFFSSSSSSS LSSPSFPIHN SSSTTTTHAP LGFSNNLQGG GPLGSKVVND DQENFGGGTN
101: NDAHSNSWWR SNSGSGDMKN KVKIRRKLRE PRFCFQTKSD VDVLDDGYKW RKYGQKVVKN SLHPRSYYRC THNNCRVKKR VERLSEDCRM VITTYEGRHN
201: HIPSDDSTSP DHDCLSSF
101: NDAHSNSWWR SNSGSGDMKN KVKIRRKLRE PRFCFQTKSD VDVLDDGYKW RKYGQKVVKN SLHPRSYYRC THNNCRVKKR VERLSEDCRM VITTYEGRHN
201: HIPSDDSTSP DHDCLSSF
Arabidopsis Description
WRKY12At2g44745 [Source:UniProtKB/TrEMBL;Acc:Q1PEU5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.