Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71963 | Canola | nucleus | 97.67 | 98.13 |
| Bra004864.1-P | Field mustard | nucleus | 97.21 | 97.21 |
| CDX95615 | Canola | nucleus, plastid | 80.0 | 90.53 |
| CDX83415 | Canola | nucleus, plastid | 78.6 | 89.89 |
| CDY30483 | Canola | nucleus | 89.77 | 87.73 |
| CDY23453 | Canola | nucleus | 88.84 | 87.61 |
| GSMUA_Achr4P17890_001 | Banana | nucleus | 40.0 | 76.79 |
| GSMUA_Achr7P06860_001 | Banana | nucleus | 40.93 | 75.21 |
| CDY72079 | Canola | nucleus | 33.49 | 64.86 |
| KRH66475 | Soybean | nucleus | 58.14 | 52.52 |
| KRH48843 | Soybean | nucleus | 56.74 | 51.48 |
| Solyc01g089960.2.1 | Tomato | nucleus | 54.42 | 49.58 |
| KRH40189 | Soybean | nucleus | 54.42 | 49.16 |
| PGSC0003DMT400080069 | Potato | nucleus | 54.42 | 46.61 |
| TraesCS2A01G392100.1 | Wheat | nucleus | 46.51 | 43.67 |
| HORVU2Hr1G093350.3 | Barley | nucleus | 46.51 | 43.48 |
| TraesCS2B01G410400.1 | Wheat | nucleus | 46.05 | 43.23 |
| TraesCS2D01G390200.1 | Wheat | nucleus | 46.05 | 43.23 |
| HORVU6Hr1G061940.1 | Barley | nucleus | 45.58 | 43.17 |
| Zm00001d017444_P001 | Maize | extracellular, vacuole | 45.58 | 42.42 |
| Zm00001d051328_P002 | Maize | nucleus | 45.58 | 41.7 |
| KXG31104 | Sorghum | nucleus | 46.05 | 41.6 |
| TraesCS6A01G242000.1 | Wheat | nucleus | 45.58 | 41.53 |
| TraesCS6D01G223900.1 | Wheat | cytosol | 45.58 | 41.53 |
| TraesCS6B01G282500.1 | Wheat | nucleus | 45.58 | 41.53 |
| Os04t0545000-01 | Rice | cytosol | 45.12 | 38.8 |
| CDX77096 | Canola | nucleus | 25.58 | 38.19 |
| KXG26824 | Sorghum | nucleus | 46.51 | 37.17 |
| CDX69672 | Canola | nucleus | 23.72 | 34.69 |
| CDX70492 | Canola | nucleus | 23.72 | 34.69 |
| CDX78504 | Canola | nucleus | 23.72 | 34.69 |
| Zm00001d002794_P001 | Maize | nucleus | 45.58 | 34.51 |
| CDX97223 | Canola | nucleus | 23.26 | 34.01 |
| CDY24990 | Canola | nucleus | 25.12 | 31.95 |
| CDY41978 | Canola | nucleus | 44.19 | 31.88 |
| CDY53184 | Canola | nucleus | 43.26 | 31.74 |
| CDX87064 | Canola | nucleus | 25.12 | 31.58 |
| CDY05537 | Canola | nucleus | 24.65 | 31.55 |
| CDX88219 | Canola | nucleus | 25.58 | 31.25 |
| CDY52627 | Canola | nucleus | 25.58 | 31.25 |
| CDX72701 | Canola | nucleus | 40.93 | 31.21 |
| CDY48151 | Canola | nucleus | 24.65 | 30.99 |
| CDY12144 | Canola | nucleus | 41.4 | 30.17 |
| CDY44466 | Canola | nucleus | 24.65 | 30.11 |
| CDY39732 | Canola | nucleus | 24.65 | 30.11 |
| CDY38208 | Canola | nucleus | 25.12 | 29.03 |
| CDY34393 | Canola | nucleus | 25.58 | 28.95 |
| CDY55479 | Canola | nucleus | 24.65 | 28.49 |
| CDY18694 | Canola | nucleus | 22.79 | 28.32 |
| CDY25554 | Canola | nucleus | 24.65 | 28.19 |
| CDY08849 | Canola | nucleus | 24.65 | 25.73 |
| CDY14512 | Canola | nucleus | 24.65 | 25.73 |
| CDY31301 | Canola | nucleus | 23.26 | 25.38 |
| CDX81259 | Canola | nucleus | 23.26 | 25.13 |
| CDX76541 | Canola | nucleus | 31.63 | 23.13 |
| CDY43194 | Canola | nucleus | 29.77 | 23.1 |
| CDY26310 | Canola | nucleus | 29.3 | 23.08 |
| CDX99859 | Canola | nucleus | 29.3 | 23.08 |
| CDY08894 | Canola | nucleus | 31.16 | 22.79 |
| CDX98155 | Canola | nucleus | 29.77 | 22.54 |
| CDY54139 | Canola | nucleus | 31.16 | 22.48 |
| CDY04276 | Canola | nucleus | 29.77 | 22.3 |
| CDY07352 | Canola | nucleus | 29.77 | 22.15 |
| CDY40910 | Canola | nucleus | 30.23 | 22.11 |
| CDX95947 | Canola | nucleus | 29.77 | 21.77 |
| CDY09083 | Canola | nucleus | 31.63 | 21.73 |
| CDX90417 | Canola | nucleus | 31.63 | 21.73 |
| CDX99495 | Canola | nucleus | 31.16 | 21.47 |
| CDX78832 | Canola | nucleus | 30.7 | 21.43 |
| CDY01523 | Canola | nucleus | 30.7 | 21.15 |
| CDY50313 | Canola | nucleus | 30.23 | 21.04 |
| CDY37794 | Canola | nucleus | 29.77 | 20.45 |
| CDX87722 | Canola | nucleus | 29.77 | 20.45 |
| CDX80094 | Canola | nucleus | 29.77 | 20.25 |
| CDY43969 | Canola | nucleus | 29.3 | 19.87 |
| CDX76630 | Canola | nucleus | 27.44 | 19.87 |
| CDY03224 | Canola | nucleus | 29.3 | 19.63 |
| CDY33471 | Canola | nucleus | 29.3 | 19.5 |
| CDX77655 | Canola | nucleus | 29.3 | 19.5 |
| CDY11416 | Canola | nucleus | 26.98 | 19.46 |
| CDY35159 | Canola | nucleus | 28.84 | 19.31 |
| CDY72613 | Canola | nucleus | 28.84 | 19.2 |
| CDY51420 | Canola | nucleus | 28.37 | 18.83 |
| CDY27500 | Canola | nucleus | 28.37 | 18.32 |
| CDY05620 | Canola | nucleus | 30.7 | 16.88 |
| CDX85413 | Canola | nucleus | 30.7 | 16.54 |
| CDY46824 | Canola | nucleus | 21.86 | 16.21 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078IGH1 | UniProt:A0A078IGH1 | EnsemblPlants:CDY48258 | ProteinID:CDY48258 |
| ProteinID:CDY48258.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00089125001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF17 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EF0AED | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaC04g05170DBnaC04g05170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IGH1]
Coordinates
chrLK032762:-:85561..88609
Molecular Weight (calculated)
24372.2 Da
IEP (calculated)
9.429
GRAVY (calculated)
-0.883
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGGRRVVV NNYDLQQVTI QENMNFLIPF EETNVLTFFS SSSSSSLSSP SFPIHNSSST TSTTHAPLGF PNNLQGGGPL RSKVVNDDQD NFRGGINNDA
101: HSSSWWRSSS GSGESKNKVK IRRKLREPRF CFQTKSDVDV LDDGYKWRKY GQKIVKNSLH PRSYYRCTHN NCRVKKRVER LSEDCRMVIT TYEGRHSHIP
201: SDESTSPDHD SLSSF
101: HSSSWWRSSS GSGESKNKVK IRRKLREPRF CFQTKSDVDV LDDGYKWRKY GQKIVKNSLH PRSYYRCTHN NCRVKKRVER LSEDCRMVIT TYEGRHSHIP
201: SDESTSPDHD SLSSF
001: MEGGGRRVFS NYDLQQVTSS STTIQENMNF LVPFEETNVL TFFSSSSSSS LSSPSFPIHN SSSTTTTHAP LGFSNNLQGG GPLGSKVVND DQENFGGGTN
101: NDAHSNSWWR SNSGSGDMKN KVKIRRKLRE PRFCFQTKSD VDVLDDGYKW RKYGQKVVKN SLHPRSYYRC THNNCRVKKR VERLSEDCRM VITTYEGRHN
201: HIPSDDSTSP DHDCLSSF
101: NDAHSNSWWR SNSGSGDMKN KVKIRRKLRE PRFCFQTKSD VDVLDDGYKW RKYGQKVVKN SLHPRSYYRC THNNCRVKKR VERLSEDCRM VITTYEGRHN
201: HIPSDDSTSP DHDCLSSF
Arabidopsis Description
WRKY12At2g44745 [Source:UniProtKB/TrEMBL;Acc:Q1PEU5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.