Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G390200.1 | Wheat | nucleus | 97.82 | 97.82 |
| HORVU2Hr1G093350.3 | Barley | nucleus | 96.94 | 96.52 |
| TraesCS2B01G410400.1 | Wheat | nucleus | 94.32 | 94.32 |
| GSMUA_Achr4P17890_001 | Banana | nucleus | 39.74 | 81.25 |
| KXG26824 | Sorghum | nucleus | 79.48 | 67.66 |
| Zm00001d002794_P001 | Maize | nucleus | 76.42 | 61.62 |
| TraesCS6A01G242000.1 | Wheat | nucleus | 54.59 | 52.97 |
| CDX83415 | Canola | nucleus, plastid | 40.17 | 48.94 |
| CDX95615 | Canola | nucleus, plastid | 40.17 | 48.42 |
| KRH66475 | Soybean | nucleus | 49.34 | 47.48 |
| AT2G44745.1 | Thale cress | nucleus | 44.98 | 47.25 |
| KRH48843 | Soybean | nucleus | 48.47 | 46.84 |
| CDY71963 | Canola | nucleus | 43.67 | 46.73 |
| CDY48258 | Canola | nucleus | 43.67 | 46.51 |
| Bra004864.1-P | Field mustard | nucleus | 43.67 | 46.51 |
| CDY23453 | Canola | nucleus | 44.1 | 46.33 |
| Bra000362.1-P | Field mustard | nucleus | 42.36 | 46.19 |
| Solyc01g089960.2.1 | Tomato | nucleus | 47.6 | 46.19 |
| CDY30483 | Canola | nucleus | 44.1 | 45.91 |
| TraesCS1A01G348600.1 | Wheat | plastid | 26.2 | 44.44 |
| PGSC0003DMT400080069 | Potato | nucleus | 48.47 | 44.22 |
| KRH40189 | Soybean | nucleus | 44.98 | 43.28 |
| TraesCS3A01G116200.1 | Wheat | plastid | 38.86 | 33.97 |
| TraesCS2A01G011000.1 | Wheat | nucleus | 28.82 | 32.2 |
| TraesCS3A01G280400.1 | Wheat | nucleus | 26.64 | 27.48 |
| TraesCS1A01G358400.1 | Wheat | plastid | 24.89 | 25.91 |
| TraesCS1A01G121500.1 | Wheat | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 21.4 | 25.0 |
| TraesCS1A01G358100.1 | Wheat | nucleus, plastid | 24.02 | 25.0 |
| TraesCS3A01G209800.1 | Wheat | nucleus | 23.58 | 23.68 |
| TraesCS3A01G248700.1 | Wheat | plastid | 20.52 | 23.15 |
| TraesCS1A01G421800.1 | Wheat | nucleus | 27.95 | 22.38 |
| TraesCS3A01G111200.1 | Wheat | nucleus | 21.4 | 21.78 |
| TraesCS1A01G421900.1 | Wheat | nucleus | 19.21 | 21.15 |
| TraesCS2A01G261900.1 | Wheat | nucleus | 26.2 | 20.98 |
| TraesCS5A01G395100.1 | Wheat | nucleus | 27.07 | 20.0 |
| TraesCS3A01G228600.1 | Wheat | nucleus | 28.38 | 18.84 |
| TraesCS3A01G242500.1 | Wheat | nucleus | 29.26 | 18.36 |
| TraesCS1A01G401800.1 | Wheat | nucleus | 29.26 | 16.83 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31221 | PANTHER:PTHR31221:SF17 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS2A01G392100 | EnsemblPlants:TraesCS2A01G392100.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2A:-:642224166..642228116
Molecular Weight (calculated)
25050.6 Da
IEP (calculated)
8.556
GRAVY (calculated)
-0.576
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGSQLGAC LPSLYALDPY ASPPLLAPLP NQHKLHQMPL VLQEQPGNHG VMFSSDHGGG LYPLLPGIPF CHSAAACEKP TGFAPLGGTG EAGTSAARAA
101: NEFASTTTTT TASCHGPSSW WKGAEKGKMK VRRKMREPRF CFQTRSEVDV LDDGYKWRKY GQKVVKNSLH PRSYYRCTHS NCRVKKRVER LSEDCRMVIT
201: TYEGRHTHTP CSDDDAAGDH TGSCAFTSF
101: NEFASTTTTT TASCHGPSSW WKGAEKGKMK VRRKMREPRF CFQTRSEVDV LDDGYKWRKY GQKVVKNSLH PRSYYRCTHS NCRVKKRVER LSEDCRMVIT
201: TYEGRHTHTP CSDDDAAGDH TGSCAFTSF
001: MEGGGRRVFS NYDLQQVTSS STTIQENMNF LVPFEETNVL TFFSSSSSSS LSSPSFPIHN SSSTTTTHAP LGFSNNLQGG GPLGSKVVND DQENFGGGTN
101: NDAHSNSWWR SNSGSGDMKN KVKIRRKLRE PRFCFQTKSD VDVLDDGYKW RKYGQKVVKN SLHPRSYYRC THNNCRVKKR VERLSEDCRM VITTYEGRHN
201: HIPSDDSTSP DHDCLSSF
101: NDAHSNSWWR SNSGSGDMKN KVKIRRKLRE PRFCFQTKSD VDVLDDGYKW RKYGQKVVKN SLHPRSYYRC THNNCRVKKR VERLSEDCRM VITTYEGRHN
201: HIPSDDSTSP DHDCLSSF
Arabidopsis Description
WRKY12At2g44745 [Source:UniProtKB/TrEMBL;Acc:Q1PEU5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.