Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G404400.1 | Wheat | nucleus | 95.48 | 95.48 |
| TraesCS5B01G399900.1 | Wheat | nucleus | 93.87 | 93.57 |
| HORVU5Hr1G096420.20 | Barley | mitochondrion, nucleus | 71.61 | 73.51 |
| Os03t0758000-01 | Rice | nucleus, plastid | 47.1 | 63.2 |
| EER90854 | Sorghum | nucleus | 62.58 | 58.61 |
| Zm00001d034073_P001 | Maize | nucleus | 61.29 | 57.4 |
| TraesCS2A01G261900.1 | Wheat | nucleus | 41.61 | 45.1 |
| TraesCS1A01G348600.1 | Wheat | plastid | 19.35 | 44.44 |
| KRH70870 | Soybean | nucleus | 40.32 | 42.66 |
| KRH75010 | Soybean | nucleus | 40.32 | 42.09 |
| VIT_01s0011g00720.t01 | Wine grape | nucleus | 40.97 | 41.64 |
| GSMUA_Achr4P23360_001 | Banana | nucleus | 34.19 | 40.46 |
| CDY04276 | Canola | nucleus | 36.13 | 39.02 |
| AT1G69310.2 | Thale cress | nucleus | 35.16 | 37.98 |
| CDY54139 | Canola | nucleus | 36.45 | 37.92 |
| CDY07352 | Canola | nucleus | 35.16 | 37.72 |
| Bra038313.1-P | Field mustard | nucleus | 35.81 | 37.12 |
| CDY40910 | Canola | nucleus | 35.16 | 37.07 |
| CDX95947 | Canola | nucleus | 35.16 | 37.07 |
| Bra004370.1-P | Field mustard | nucleus | 35.16 | 37.07 |
| Bra004002.1-P | Field mustard | nucleus | 34.52 | 37.02 |
| CDY50313 | Canola | nucleus | 36.13 | 36.25 |
| PGSC0003DMT400072958 | Potato | mitochondrion, nucleus | 37.74 | 35.89 |
| Solyc05g012500.2.1 | Tomato | nucleus | 37.42 | 35.47 |
| TraesCS2A01G011000.1 | Wheat | nucleus | 19.68 | 29.76 |
| TraesCS1A01G421800.1 | Wheat | nucleus | 27.1 | 29.37 |
| TraesCS3A01G242500.1 | Wheat | nucleus | 33.87 | 28.77 |
| TraesCS1A01G421900.1 | Wheat | nucleus | 18.71 | 27.88 |
| TraesCS3A01G228600.1 | Wheat | nucleus | 30.97 | 27.83 |
| TraesCS2A01G392100.1 | Wheat | nucleus | 20.0 | 27.07 |
| TraesCS1A01G121500.1 | Wheat | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 17.1 | 27.04 |
| TraesCS1A01G401800.1 | Wheat | nucleus | 34.19 | 26.63 |
| TraesCS3A01G248700.1 | Wheat | plastid | 17.42 | 26.6 |
| TraesCS3A01G280400.1 | Wheat | nucleus | 19.03 | 26.58 |
| TraesCS3A01G209800.1 | Wheat | nucleus | 19.35 | 26.32 |
| TraesCS1A01G358400.1 | Wheat | plastid | 18.39 | 25.91 |
| TraesCS3A01G111200.1 | Wheat | nucleus | 18.06 | 24.89 |
| TraesCS6A01G242000.1 | Wheat | nucleus | 18.71 | 24.58 |
| TraesCS1A01G358100.1 | Wheat | nucleus, plastid | 17.42 | 24.55 |
| TraesCS3A01G116200.1 | Wheat | plastid | 20.65 | 24.43 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31221 | PANTHER:PTHR31221:SF77 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS5A01G395100 | EnsemblPlants:TraesCS5A01G395100.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5A:-:590577546..590579922
Molecular Weight (calculated)
32244.3 Da
IEP (calculated)
6.246
GRAVY (calculated)
-0.520
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGAAGDGPE GVGGGGDWPP FAGDAFGDYS SSVFAELGGW SDGLGAGAGD LPPLDLPAAS ASAQVQLAPS DEIMPAASGE PAGATSSCSS GDGGAAAAAE
101: NADKPQSAAD AASMKPTTAG KKGQKRARQQ RFAFVTKSEV DHLEDGYRWR KYGQKAVKNS PFPRSYYRCT NSKCTVKKRV ERSSEDPSVV ITTYEGQHCH
201: HQTSFQRGGM HFHGGATVAL AEQMSFVSTQ QLYNLPPLRR QQMNPASSES AVSSVPPSLQ QLNGGDELRR STSYSPMASA TQTPSSLVPP DVSFDMGLLG
301: DIVPPGVRNG
101: NADKPQSAAD AASMKPTTAG KKGQKRARQQ RFAFVTKSEV DHLEDGYRWR KYGQKAVKNS PFPRSYYRCT NSKCTVKKRV ERSSEDPSVV ITTYEGQHCH
201: HQTSFQRGGM HFHGGATVAL AEQMSFVSTQ QLYNLPPLRR QQMNPASSES AVSSVPPSLQ QLNGGDELRR STSYSPMASA TQTPSSLVPP DVSFDMGLLG
301: DIVPPGVRNG
001: MNDPDNPDLS NDDSAWRELT LTAQDSDFFD RDTSNILSDF GWNLHHSSDH PHSLRFDSDL TQTTGVKPTT VTSSCSSSAA VSVAVTSTNN NPSATSSSSE
101: DPAENSTASA EKTPPPETPV KEKKKAQKRI RQPRFAFMTK SDVDNLEDGY RWRKYGQKAV KNSPFPRSYY RCTNSRCTVK KRVERSSDDP SIVITTYEGQ
201: HCHQTIGFPR GGILTAHDPH SFTSHHHLPP PLPNPYYYQE LLHQLHRDNN APSPRLPRPT TEDTPAVSTP SEEGLLGDIV PQTMRNP
101: DPAENSTASA EKTPPPETPV KEKKKAQKRI RQPRFAFMTK SDVDNLEDGY RWRKYGQKAV KNSPFPRSYY RCTNSRCTVK KRVERSSDDP SIVITTYEGQ
201: HCHQTIGFPR GGILTAHDPH SFTSHHHLPP PLPNPYYYQE LLHQLHRDNN APSPRLPRPT TEDTPAVSTP SEEGLLGDIV PQTMRNP
Arabidopsis Description
WRKY57At1g69310 [Source:UniProtKB/TrEMBL;Acc:Q147N6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.