Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plasma membrane, golgi, nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 1
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G027700.1 | Barley | nucleus | 80.61 | 79.4 |
| TraesCS1D01G122400.1 | Wheat | nucleus | 78.06 | 78.87 |
| KRH15622 | Soybean | nucleus | 24.49 | 70.59 |
| EES19157 | Sorghum | nucleus | 63.27 | 60.19 |
| Zm00001d037607_P001 | Maize | nucleus | 59.18 | 59.49 |
| Zm00001d009939_P001 | Maize | nucleus | 61.22 | 58.54 |
| Os05t0183100-01 | Rice | nucleus | 57.14 | 52.83 |
| KRH61557 | Soybean | nucleus | 34.18 | 41.61 |
| VIT_04s0008g01470.t01 | Wine grape | nucleus | 34.18 | 40.36 |
| KRH52231 | Soybean | nucleus | 32.14 | 39.13 |
| TraesCS3A01G111200.1 | Wheat | nucleus | 43.88 | 38.22 |
| GSMUA_Achr7P09680_001 | Banana | nucleus | 38.27 | 37.13 |
| KRH05396 | Soybean | nucleus | 30.61 | 36.59 |
| Solyc08g062490.2.1 | Tomato | nucleus | 32.65 | 35.36 |
| TraesCS1A01G358400.1 | Wheat | plastid | 39.29 | 35.0 |
| TraesCS1A01G348600.1 | Wheat | plastid | 23.98 | 34.81 |
| TraesCS1A01G358100.1 | Wheat | nucleus, plastid | 38.27 | 34.09 |
| TraesCS3A01G248700.1 | Wheat | plastid | 35.2 | 33.99 |
| CDX87064 | Canola | nucleus | 29.59 | 33.92 |
| AT5G26170.1 | Thale cress | nucleus | 29.59 | 33.53 |
| Bra009885.1-P | Field mustard | nucleus | 29.59 | 32.95 |
| CDX88219 | Canola | nucleus | 29.59 | 32.95 |
| CDY48151 | Canola | nucleus | 28.57 | 32.75 |
| CDY05537 | Canola | nucleus | 27.55 | 32.14 |
| Bra020546.1-P | Field mustard | nucleus | 27.55 | 32.14 |
| CDY24990 | Canola | nucleus | 27.55 | 31.95 |
| CDY52627 | Canola | nucleus | 28.57 | 31.82 |
| TraesCS3A01G209800.1 | Wheat | nucleus | 34.69 | 29.82 |
| Bra036563.1-P | Field mustard | nucleus | 22.96 | 28.48 |
| PGSC0003DMT400021144 | Potato | nucleus | 17.35 | 26.56 |
| TraesCS2A01G011000.1 | Wheat | nucleus | 26.02 | 24.88 |
| TraesCS3A01G280400.1 | Wheat | nucleus | 27.55 | 24.32 |
| TraesCS2A01G392100.1 | Wheat | nucleus | 25.0 | 21.4 |
| TraesCS6A01G242000.1 | Wheat | nucleus | 23.98 | 19.92 |
| TraesCS3A01G116200.1 | Wheat | plastid | 24.49 | 18.32 |
| TraesCS2A01G261900.1 | Wheat | nucleus | 26.53 | 18.18 |
| TraesCS1A01G421800.1 | Wheat | nucleus | 26.02 | 17.83 |
| TraesCS5A01G395100.1 | Wheat | nucleus | 27.04 | 17.1 |
| TraesCS3A01G228600.1 | Wheat | nucleus | 26.02 | 14.78 |
| TraesCS1A01G421900.1 | Wheat | nucleus | 14.8 | 13.94 |
| TraesCS3A01G242500.1 | Wheat | nucleus | 25.51 | 13.7 |
| TraesCS1A01G401800.1 | Wheat | nucleus | 24.49 | 12.06 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31221 | PANTHER:PTHR31221:SF43 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS1A01G121500 | EnsemblPlants:TraesCS1A01G121500.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr1A:-:135182594..135183536
Molecular Weight (calculated)
19141.2 Da
IEP (calculated)
9.032
GRAVY (calculated)
-0.599
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASLGLNPE CVFSSAYAYS SPFLADYYXX XXXXXXXXXX XXXXXXXXXX XXHHPFDQFE HSLPTPTAQI SFAGAGDDEH RGEKKIKISA RVSSGRIGFR
101: TRSEVEILDD GFKWRKYGKK AVKNSPNPRN YYRCSAEGCG VKKRVERDRD DPRYVVTTYD GVHNHATPGA AAQYYCYSPP RSSPPAAYSA AGLLQF
101: TRSEVEILDD GFKWRKYGKK AVKNSPNPRN YYRCSAEGCG VKKRVERDRD DPRYVVTTYD GVHNHATPGA AAQYYCYSPP RSSPPAAYSA AGLLQF
001: MNDADTNLGS SFSDDTHSVF EFPELDLSDE WMDDDLVSAV SGMNQSYGYQ TSDVAGALFS GSSSCFSHPE SPSTKTYVAA TATASADNQN KKEKKKIKGR
101: VAFKTRSEVE VLDDGFKWRK YGKKMVKNSP HPRNYYKCSV DGCPVKKRVE RDRDDPSFVI TTYEGSHNHS SMN
101: VAFKTRSEVE VLDDGFKWRK YGKKMVKNSP HPRNYYKCSV DGCPVKKRVE RDRDDPSFVI TTYEGSHNHS SMN
Arabidopsis Description
WRKY50Probable WRKY transcription factor 50 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.