Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87064 | Canola | nucleus | 82.08 | 83.04 |
| Bra036563.1-P | Field mustard | nucleus | 73.99 | 81.01 |
| Bra020546.1-P | Field mustard | nucleus | 78.03 | 80.36 |
| CDY48151 | Canola | nucleus | 79.19 | 80.12 |
| CDX88219 | Canola | nucleus | 81.5 | 80.11 |
| CDY05537 | Canola | nucleus | 77.46 | 79.76 |
| Bra009885.1-P | Field mustard | nucleus | 80.92 | 79.55 |
| CDY52627 | Canola | nucleus | 80.35 | 78.98 |
| CDY24990 | Canola | nucleus | 76.88 | 78.7 |
| KRH15622 | Soybean | nucleus | 28.32 | 72.06 |
| GSMUA_Achr3P20450_001 | Banana | cytosol, nucleus, plastid | 31.21 | 57.45 |
| KRH61557 | Soybean | nucleus | 50.87 | 54.66 |
| KRH52231 | Soybean | nucleus | 49.71 | 53.42 |
| VIT_04s0008g01470.t01 | Wine grape | nucleus | 46.24 | 48.19 |
| KRH05396 | Soybean | nucleus | 45.66 | 48.17 |
| AT2G46130.1 | Thale cress | nucleus | 24.28 | 38.53 |
| Solyc08g062490.2.1 | Tomato | nucleus | 39.31 | 37.57 |
| AT3G01970.1 | Thale cress | nucleus | 29.48 | 34.69 |
| AT5G64810.1 | Thale cress | nucleus | 38.73 | 34.54 |
| GSMUA_Achr7P09680_001 | Banana | nucleus | 39.88 | 34.16 |
| AT5G13080.1 | Thale cress | nucleus, plastid | 28.32 | 33.79 |
| Zm00001d037607_P001 | Maize | nucleus | 37.57 | 33.33 |
| Zm00001d011133_P001 | Maize | plastid | 36.99 | 32.65 |
| EES19157 | Sorghum | nucleus | 38.73 | 32.52 |
| Zm00001d009939_P001 | Maize | nucleus | 38.15 | 32.2 |
| PGSC0003DMT400021144 | Potato | nucleus | 23.7 | 32.03 |
| Os01t0186000-01 | Rice | cytosol, nucleus | 35.26 | 31.61 |
| Os05t0183100-01 | Rice | nucleus | 37.57 | 30.66 |
| HORVU1Hr1G027700.1 | Barley | nucleus | 35.26 | 30.65 |
| EES18577 | Sorghum | plastid | 38.73 | 30.59 |
| TraesCS1D01G122400.1 | Wheat | nucleus | 34.1 | 30.41 |
| Zm00001d043663_P001 | Maize | plastid | 36.42 | 29.86 |
| TraesCS1A01G121500.1 | Wheat | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 33.53 | 29.59 |
| TraesCS1B01G374700.1 | Wheat | nucleus, plastid | 37.57 | 29.15 |
| TraesCS1A01G358400.1 | Wheat | plastid | 36.99 | 29.09 |
| TraesCS3B01G277300.1 | Wheat | plastid | 33.53 | 29.0 |
| HORVU0Hr1G001430.1 | Barley | plastid | 36.42 | 28.9 |
| TraesCS1D01G362900.1 | Wheat | nucleus, plastid | 36.42 | 28.64 |
| TraesCS1B01G374900.1 | Wheat | plastid | 36.42 | 28.64 |
| Zm00001d038843_P001 | Maize | plastid | 36.42 | 28.51 |
| TraesCS3D01G248500.1 | Wheat | mitochondrion | 33.53 | 28.29 |
| TraesCS1D01G363300.1 | Wheat | plastid | 36.42 | 28.25 |
| TraesCS1A01G358100.1 | Wheat | nucleus, plastid | 35.84 | 28.18 |
| TraesCS3A01G248700.1 | Wheat | plastid | 32.95 | 28.08 |
| Os05t0537100-00 | Rice | cytosol, plastid | 35.84 | 28.05 |
| AT5G41570.1 | Thale cress | nucleus | 28.32 | 27.37 |
| HORVU3Hr1G067510.1 | Barley | mitochondrion, plastid | 33.53 | 27.36 |
| TraesCS3A01G111200.1 | Wheat | nucleus | 35.26 | 27.11 |
| TraesCS3D01G113200.1 | Wheat | nucleus | 34.68 | 26.91 |
| KXG33244 | Sorghum | plastid | 34.68 | 26.67 |
| TraesCS3B01G129900.1 | Wheat | nucleus | 33.53 | 26.13 |
| AT2G44745.1 | Thale cress | nucleus | 32.37 | 25.69 |
| AT1G64000.1 | Thale cress | nucleus | 28.9 | 25.64 |
| HORVU3Hr1G020140.1 | Barley | mitochondrion | 35.26 | 24.8 |
| Zm00001d008793_P001 | Maize | nucleus | 31.79 | 24.02 |
| Os01t0714800-01 | Rice | plastid | 32.95 | 23.27 |
| HORVU1Hr1G080300.1 | Barley | nucleus | 36.42 | 22.58 |
| EES00157 | Sorghum | nucleus | 32.95 | 21.92 |
| Zm00001d039531_P001 | Maize | nucleus | 33.53 | 21.25 |
| AT3G62340.1 | Thale cress | nucleus | 32.37 | 20.22 |
| AT1G29860.1 | Thale cress | nucleus | 32.95 | 20.21 |
| AT1G69310.2 | Thale cress | nucleus | 33.53 | 20.21 |
| AT4G39410.1 | Thale cress | nucleus | 32.37 | 18.42 |
| AT2G47260.1 | Thale cress | nucleus | 35.84 | 18.4 |
| AT4G18170.1 | Thale cress | nucleus | 32.95 | 17.92 |
| AT5G46350.1 | Thale cress | nucleus | 31.79 | 16.87 |
| AT5G49520.1 | Thale cress | nucleus | 32.37 | 14.04 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:832686 | EMBL:AB493759 | EMBL:AC005965 | ProteinID:AED93532.1 |
| ArrayExpress:AT5G26170 | EnsemblPlantsGene:AT5G26170 | RefSeq:AT5G26170 | TAIR:AT5G26170 | RefSeq:AT5G26170-TAIR-G | EnsemblPlants:AT5G26170.1 |
| TAIR:AT5G26170.1 | EMBL:AY071847 | UniProt:C0SVQ6 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009719 |
| GO:GO:0009867 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0043565 | GO:GO:0050832 |
| InterPro:IPR003657 | InterPro:IPR036576 | RefSeq:NP_197989.2 | PFAM:PF03106 | PO:PO:0000293 | PFscan:PS50811 |
| PANTHER:PTHR31221 | PANTHER:PTHR31221:SF83 | UniProt:Q8VWQ5 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI00000A478B |
| Symbol:WRKY50 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : |
Description
WRKY50Probable WRKY transcription factor 50 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWQ5]
Coordinates
chr5:-:9146879..9148391
Molecular Weight (calculated)
19292.1 Da
IEP (calculated)
6.354
GRAVY (calculated)
-0.875
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDADTNLGS SFSDDTHSVF EFPELDLSDE WMDDDLVSAV SGMNQSYGYQ TSDVAGALFS GSSSCFSHPE SPSTKTYVAA TATASADNQN KKEKKKIKGR
101: VAFKTRSEVE VLDDGFKWRK YGKKMVKNSP HPRNYYKCSV DGCPVKKRVE RDRDDPSFVI TTYEGSHNHS SMN
101: VAFKTRSEVE VLDDGFKWRK YGKKMVKNSP HPRNYYKCSV DGCPVKKRVE RDRDDPSFVI TTYEGSHNHS SMN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.