Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY03224 | Canola | nucleus | 78.53 | 79.75 |
| CDY35159 | Canola | nucleus | 78.22 | 79.44 |
| Bra017561.1-P | Field mustard | nucleus | 78.22 | 79.44 |
| CDY43969 | Canola | nucleus | 76.69 | 78.86 |
| Bra022033.1-P | Field mustard | nucleus | 76.69 | 78.86 |
| CDY33471 | Canola | nucleus | 77.61 | 78.33 |
| Bra025021.1-P | Field mustard | nucleus | 77.3 | 78.02 |
| CDX77655 | Canola | nucleus | 76.99 | 77.71 |
| AT4G18170.1 | Thale cress | nucleus | 58.9 | 60.38 |
| CDX87722 | Canola | nucleus | 50.61 | 52.72 |
| AT2G46130.1 | Thale cress | nucleus | 15.95 | 47.71 |
| VIT_10s0003g02810.t01 | Wine grape | nucleus | 39.26 | 40.13 |
| AT1G29860.1 | Thale cress | nucleus | 33.74 | 39.01 |
| AT5G13080.1 | Thale cress | nucleus, plastid | 16.87 | 37.93 |
| AT3G01970.1 | Thale cress | nucleus | 16.87 | 37.41 |
| KRH58435 | Soybean | nucleus | 40.49 | 36.87 |
| KRH42308 | Soybean | nucleus | 40.49 | 35.58 |
| GSMUA_Achr6P27090_001 | Banana | nucleus | 30.06 | 32.67 |
| AT5G26170.1 | Thale cress | nucleus | 16.87 | 31.79 |
| OQU78504 | Sorghum | nucleus | 25.15 | 31.3 |
| AT2G44745.1 | Thale cress | nucleus | 20.86 | 31.19 |
| GSMUA_Achr9P06750_001 | Banana | nucleus | 28.22 | 31.19 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.3 | 30.9 |
| AT5G41570.1 | Thale cress | nucleus | 16.87 | 30.73 |
| AT1G69310.2 | Thale cress | nucleus | 25.46 | 28.92 |
| AT2G47260.1 | Thale cress | nucleus | 28.83 | 27.89 |
| AT3G62340.1 | Thale cress | nucleus | 23.62 | 27.8 |
| TraesCS1D01G430000.1 | Wheat | nucleus | 25.15 | 27.7 |
| AT1G64000.1 | Thale cress | nucleus | 16.26 | 27.18 |
| TraesCS1D01G429800.1 | Wheat | nucleus | 23.93 | 27.08 |
| TraesCS1A01G421800.1 | Wheat | nucleus | 23.62 | 26.92 |
| TraesCS1B01G453200.1 | Wheat | nucleus | 23.31 | 26.48 |
| TraesCS1A01G421900.1 | Wheat | nucleus | 16.87 | 26.44 |
| Os05t0583000-01 | Rice | nucleus | 26.99 | 26.11 |
| HORVU1Hr1G092130.1 | Barley | nucleus | 24.54 | 25.89 |
| TraesCS1D01G429900.1 | Wheat | nucleus | 24.23 | 25.73 |
| AT5G64810.1 | Thale cress | nucleus | 15.03 | 25.26 |
| TraesCS1B01G453300.1 | Wheat | nucleus | 23.93 | 25.0 |
| AT4G39410.1 | Thale cress | nucleus | 23.31 | 25.0 |
| AT5G49520.1 | Thale cress | nucleus | 27.61 | 22.56 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:834678 | ProteinID:AED95372.1 | EMBL:AF404855 | ArrayExpress:AT5G46350 |
| EnsemblPlantsGene:AT5G46350 | RefSeq:AT5G46350 | TAIR:AT5G46350 | RefSeq:AT5G46350-TAIR-G | EnsemblPlants:AT5G46350.1 | TAIR:AT5G46350.1 |
| EMBL:AY063916 | EMBL:AY096426 | Unigene:At.26517 | ProteinID:BAB11090.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 |
| GO:GO:0006952 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009605 | GO:GO:0009607 |
| GO:GO:0009628 | GO:GO:0009719 | GO:GO:0009737 | GO:GO:0009987 | GO:GO:0042742 | GO:GO:0043565 |
| GO:GO:0050832 | GO:GO:0051607 | GO:GO:0070301 | GO:GO:1901002 | InterPro:IPR003657 | InterPro:IPR036576 |
| RefSeq:NP_199447.1 | PFAM:PF03106 | PIRSF:PIRSF038130 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PFscan:PS50811 |
| PANTHER:PTHR31221 | PANTHER:PTHR31221:SF56 | UniProt:Q9FL26 | SMART:SM00774 | SUPFAM:SSF118290 | InterPro:TF_WRKY_IIc |
| UniParc:UPI00000017B8 | Symbol:WRKY8 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
WRKY8Probable WRKY transcription factor 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL26]
Coordinates
chr5:-:18801164..18804056
Molecular Weight (calculated)
37295.9 Da
IEP (calculated)
8.089
GRAVY (calculated)
-1.025
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MSHEIKDLNN YHYTSSYNHY NINNQNMINL PYVSGPSAYN ANMISSSQVG FDLPSKNLSP QGAFELGFEL SPSSSDFFNP SLDQENGLYN AYNYNSSQKS
101: HEVVGDGCAT IKSEVRVSAS PSSSEADHHP GEDSGKIRKK REVRDGGEDD QRSQKVVKTK KKEEKKKEPR VSFMTKTEVD HLEDGYRWRK YGQKAVKNSP
201: YPRSYYRCTT QKCNVKKRVE RSYQDPTVVI TTYESQHNHP IPTNRRTAMF SGTTASDYNP SSSPIFSDLI INTPRSFSND DLFRVPYASV NVNPSYHQQQ
301: HGFHQQESEF ELLKEMFPSV FFKQEP
101: HEVVGDGCAT IKSEVRVSAS PSSSEADHHP GEDSGKIRKK REVRDGGEDD QRSQKVVKTK KKEEKKKEPR VSFMTKTEVD HLEDGYRWRK YGQKAVKNSP
201: YPRSYYRCTT QKCNVKKRVE RSYQDPTVVI TTYESQHNHP IPTNRRTAMF SGTTASDYNP SSSPIFSDLI INTPRSFSND DLFRVPYASV NVNPSYHQQQ
301: HGFHQQESEF ELLKEMFPSV FFKQEP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.