Factsheet for Bra025021.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33471	Canola	nucleus	99.07	99.07
CDX77655	Canola	nucleus	95.05	95.05
Bra017561.1-P	Field mustard	nucleus	82.35	82.87
Bra022033.1-P	Field mustard	nucleus	80.81	82.33
AT5G46350.1	Thale cress	nucleus	78.02	77.3
Bra040926.1-P	Field mustard	nucleus	53.87	59.18
Bra012614.1-P	Field mustard	nucleus	56.97	58.97
Bra013289.1-P	Field mustard	nucleus	53.56	56.17
VIT_10s0003g02810.t01	Wine grape	nucleus	40.87	41.38
Bra040557.1-P	Field mustard	nucleus	17.65	39.58
Bra030178.1-P	Field mustard	nucleus	33.75	39.35
Bra032340.1-P	Field mustard	nucleus	33.13	39.19
KRH58435	Soybean	nucleus	41.18	37.15
KRH42308	Soybean	nucleus	40.87	35.58
Bra008858.1-P	Field mustard	nucleus	16.1	35.37
Bra006178.1-P	Field mustard	nucleus	16.1	35.37
Bra020546.1-P	Field mustard	nucleus	17.65	33.93
GSMUA_Achr6P27090_001	Banana	nucleus	29.72	32.0
Bra000362.1-P	Field mustard	nucleus	20.74	31.9
GSMUA_Achr9P06750_001	Banana	nucleus	28.79	31.53
OQU78504	Sorghum	nucleus	25.08	30.92
Bra025490.1-P	Field mustard	nucleus	16.41	30.46
Bra009885.1-P	Field mustard	nucleus	16.1	29.55
GSMUA_AchrUn_...	Banana	nucleus	26.32	29.51
Bra004466.1-P	Field mustard	nucleus	29.1	29.47
Bra004864.1-P	Field mustard	nucleus	19.5	29.3
Bra021393.1-P	Field mustard	nucleus	29.1	29.1
Bra027675.1-P	Field mustard	nucleus	16.72	28.57
Bra004370.1-P	Field mustard	nucleus	26.01	28.57
Bra036563.1-P	Field mustard	nucleus	13.93	28.48
Bra027768.1-P	Field mustard	nucleus	16.41	28.34
Bra004002.1-P	Field mustard	nucleus	24.77	27.68
Bra038313.1-P	Field mustard	nucleus	25.08	27.09
Bra007674.1-P	Field mustard	nucleus	24.77	26.85
TraesCS1D01G430000.1	Wheat	nucleus	24.46	26.69
TraesCS1A01G421800.1	Wheat	nucleus	23.53	26.57
TraesCS1B01G453200.1	Wheat	nucleus	23.53	26.48
Os05t0583000-01	Rice	nucleus	27.55	26.41
TraesCS1D01G429800.1	Wheat	nucleus	23.22	26.04
TraesCS1A01G421900.1	Wheat	nucleus	16.72	25.96
Bra037796.1-P	Field mustard	nucleus	13.31	25.6
HORVU1Hr1G092130.1	Barley	nucleus	24.46	25.57
Bra036138.1-P	Field mustard	nucleus	27.86	25.5
TraesCS1D01G429900.1	Wheat	nucleus	24.15	25.41
TraesCS1B01G453300.1	Wheat	nucleus	24.46	25.32
Bra033616.1-P	Field mustard	nucleus	22.29	24.66
Bra020628.1-P	Field mustard	nucleus	29.72	24.49
Bra010683.1-P	Field mustard	nucleus	22.29	24.32
Bra011861.1-P	Field mustard	nucleus	22.29	24.16
Bra010032.1-P	Field mustard	nucleus	29.1	23.56
Bra024328.1-P	Field mustard	nucleus	14.24	22.33
Bra031900.1-P	Field mustard	nucleus	13.31	21.83
Bra037637.1-P	Field mustard	nucleus	12.07	21.55

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra025021	EnsemblPlants:Bra025021.1	EnsemblPlants:Bra025021.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
UniProt:M4E8B5	PFAM:PF03106	PIRSF:PIRSF038130	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF56
SMART:SM00774	SUPFAM:SSF118290	InterPro:TF_WRKY_IIc	UniParc:UPI000253FBD3	InterPro:WRKY_dom	InterPro:WRKY_dom_sf
SEG:seg	:	:	:	:	:

Description

AT5G46350 (E=8e-112) WRKY8, ATWRKY8 | WRKY8; transcription factor

Coordinates

chrA06:+:24732171..24734605

Molecular Weight (calculated)

36615.1 Da

IEP (calculated)

7.419

GRAVY (calculated)

-0.959

Length

323 amino acids

Sequence
(BLAST)

001: MSNETKDLNN YHFTSSYDHY NNISSQSIMN LVYLSGPSSY TANMISSQIG SDLQSSPRGA CGLGFELSPS STGFFNTSID QENDFYNAYN YNTSHKSHEV
101: VGGGGAIVES ETKVSASPSS SEHHHGEDSG KSLMKREADD GGKDIDQRSQ KVVKTKKKEE KKQREPRVSF MTKTDVDHLE DGYRWRKYGQ KAVKNSPYPR
201: SYYRCTTQKC NVKKRVERSY QDPTVVITTY ESQHNHPIPT SRRTAMFSGP AACSYNSSSL SPVSDFIINT PRTFSHDDLF RAPYANMNVN ANYQQQQSQE
301: FHHESDFELL KEMFPSVFLK QEP

Best Arabidopsis Sequence Match ( AT5G46350.1 )
(BLAST)

001: MSHEIKDLNN YHYTSSYNHY NINNQNMINL PYVSGPSAYN ANMISSSQVG FDLPSKNLSP QGAFELGFEL SPSSSDFFNP SLDQENGLYN AYNYNSSQKS
101: HEVVGDGCAT IKSEVRVSAS PSSSEADHHP GEDSGKIRKK REVRDGGEDD QRSQKVVKTK KKEEKKKEPR VSFMTKTEVD HLEDGYRWRK YGQKAVKNSP
201: YPRSYYRCTT QKCNVKKRVE RSYQDPTVVI TTYESQHNHP IPTNRRTAMF SGTTASDYNP SSSPIFSDLI INTPRSFSND DLFRVPYASV NVNPSYHQQQ
301: HGFHQQESEF ELLKEMFPSV FFKQEP

Arabidopsis Description

WRKY8Probable WRKY transcription factor 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL26]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.