Factsheet for Bra007674.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11416	Canola	nucleus	99.66	99.66
CDX76630	Canola	nucleus	88.25	88.55
AT3G62340.1	Thale cress	nucleus	62.75	67.51
Bra040557.1-P	Field mustard	nucleus	18.79	38.89
Bra008858.1-P	Field mustard	nucleus	18.12	36.73
Bra006178.1-P	Field mustard	nucleus	18.12	36.73
Bra004466.1-P	Field mustard	nucleus	35.23	32.92
Bra025490.1-P	Field mustard	nucleus	18.46	31.61
Bra021393.1-P	Field mustard	nucleus	34.23	31.58
Bra020546.1-P	Field mustard	nucleus	17.45	30.95
Bra009885.1-P	Field mustard	nucleus	17.45	29.55
PGSC0003DMT400023368	Potato	nucleus	30.87	29.02
Bra030178.1-P	Field mustard	nucleus	26.85	28.88
Bra027675.1-P	Field mustard	nucleus	18.12	28.57
Bra040926.1-P	Field mustard	nucleus	27.85	28.23
Solyc01g079260.2.1	Tomato	nucleus	30.2	28.12
Bra037796.1-P	Field mustard	nucleus	15.77	27.98
Bra004370.1-P	Field mustard	nucleus	27.18	27.55
Bra032340.1-P	Field mustard	nucleus	25.17	27.47
Bra027768.1-P	Field mustard	nucleus	17.11	27.27
Bra000362.1-P	Field mustard	nucleus	19.13	27.14
Bra004864.1-P	Field mustard	nucleus	19.46	26.98
Bra013289.1-P	Field mustard	nucleus	27.52	26.62
Bra012614.1-P	Field mustard	nucleus	27.85	26.6
Bra036563.1-P	Field mustard	nucleus	14.09	26.58
Bra004002.1-P	Field mustard	nucleus	25.5	26.3
Bra038313.1-P	Field mustard	nucleus	26.17	26.09
Bra022033.1-P	Field mustard	nucleus	27.52	25.87
Bra031900.1-P	Field mustard	nucleus	16.78	25.38
Bra025021.1-P	Field mustard	nucleus	26.85	24.77
Bra024328.1-P	Field mustard	nucleus	17.11	24.76
Bra036138.1-P	Field mustard	nucleus	28.86	24.36
Bra017561.1-P	Field mustard	nucleus	26.17	24.3
Bra020628.1-P	Field mustard	nucleus	30.87	23.47
Bra010032.1-P	Field mustard	nucleus	29.19	21.8
Bra011861.1-P	Field mustard	nucleus	21.48	21.48
Bra033616.1-P	Field mustard	nucleus	20.81	21.23
Bra010683.1-P	Field mustard	nucleus	20.81	20.95
Bra037637.1-P	Field mustard	nucleus	10.74	17.68

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra007674	EnsemblPlants:Bra007674.1	EnsemblPlants:Bra007674.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
UniProt:M4CTY0	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF83	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI0002542AC2	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

AT3G62340 (E=2e-086) WRKY68, AtWRKY68 | WRKY68; transcription factor

Coordinates

chrA09:-:30351113..30352204

Molecular Weight (calculated)

34164.7 Da

IEP (calculated)

7.696

GRAVY (calculated)

-0.966

Length

298 amino acids

Sequence
(BLAST)

001: MEKTGAGMTF SDLGQRRADP SSLSDSSWER YPVGFMELLG VLHQDSSRYA LTHMPPMQLT ATPNPSSSIS YALCEAVTGE ESNRYYQKLE NDDEEQKHKR
101: NKRFKSTRSS EQTKMKAPRV SFITKSQVNN LDDGYKWRKY GQKPVRNSPF PRSYYRCTIS CCNVKKRVER SFTDQSSVIT TYEGQHTHPR PLILSRQGSF
201: GSDGSASEAY FDLTPTLPPQ LHQLFDYNNH HQQQNQELSP FGTEYLSRQE KEFNHDGGDH YHVIKPRRTQ DLLDGAGLVK DNGLLQDVVP AHIINEEY

Best Arabidopsis Sequence Match ( AT3G62340.1 )
(BLAST)

001: MENVGVGMPF YDLGQTRVYP LLSDFHDLSA ERYPVGFMDL LGVHRHTPTH TPLMHFPTTP NSSSSEAVNG DDEEEEDGEE QQHKTKKRFK FTKMSRKQTK
101: KKVPKVSFIT RSEVLHLDDG YKWRKYGQKP VKDSPFPRNY YRCTTTWCDV KKRVERSFSD PSSVITTYEG QHTHPRPLLI MPKEGSSPSN GSASRAHIGL
201: PTLPPQLLDY NNQQQQAPSS FGTEYINRQE KGINHDDDDD HVVKKSRTRD LLDGAGLVKD HGLLQDVVPS HIIKEEY

Arabidopsis Description

WRKY68Probable WRKY transcription factor 68 [Source:UniProtKB/Swiss-Prot;Acc:Q93WV6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.