Factsheet for Bra010032.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85413	Canola	nucleus	95.74	95.74
AT5G49520.1	Thale cress	nucleus	84.46	84.46
Bra036138.1-P	Field mustard	nucleus	73.68	83.29
Bra020628.1-P	Field mustard	nucleus	80.2	81.63
VIT_05s0077g00730.t01	Wine grape	nucleus	35.59	45.95
Bra040557.1-P	Field mustard	nucleus	16.29	45.14
Bra006178.1-P	Field mustard	nucleus	15.54	42.18
Bra008858.1-P	Field mustard	nucleus	15.54	42.18
KRH36956	Soybean	nucleus	33.33	40.18
KRH11917	Soybean	nucleus	33.08	37.08
GSMUA_AchrUn_...	Banana	nucleus	26.82	35.55
GSMUA_Achr8P10740_001	Banana	nucleus	27.32	34.82
Bra032340.1-P	Field mustard	nucleus	23.56	34.43
Bra030178.1-P	Field mustard	nucleus	23.81	34.3
Bra038313.1-P	Field mustard	nucleus	25.56	34.11
Bra020546.1-P	Field mustard	nucleus	14.29	33.93
Bra004002.1-P	Field mustard	nucleus	24.31	33.56
Bra025490.1-P	Field mustard	nucleus	14.54	33.33
Bra004370.1-P	Field mustard	nucleus	24.56	33.33
Bra004466.1-P	Field mustard	nucleus	26.32	32.92
Bra040926.1-P	Field mustard	nucleus	23.81	32.31
Bra009885.1-P	Field mustard	nucleus	14.04	31.82
Bra012614.1-P	Field mustard	nucleus	24.81	31.73
Bra022033.1-P	Field mustard	nucleus	25.06	31.55
Bra027675.1-P	Field mustard	nucleus	14.79	31.22
Bra027768.1-P	Field mustard	nucleus	14.54	31.02
Bra013289.1-P	Field mustard	nucleus	23.81	30.84
Bra004864.1-P	Field mustard	nucleus	16.54	30.7
Bra021393.1-P	Field mustard	nucleus	24.81	30.65
Bra000362.1-P	Field mustard	nucleus	16.04	30.48
Bra037796.1-P	Field mustard	nucleus	12.53	29.76
Bra007674.1-P	Field mustard	nucleus	21.8	29.19
Bra036563.1-P	Field mustard	nucleus	11.53	29.11
Bra025021.1-P	Field mustard	nucleus	23.56	29.1
Bra017561.1-P	Field mustard	nucleus	23.06	28.66
Bra024328.1-P	Field mustard	nucleus	14.29	27.67
Bra031900.1-P	Field mustard	nucleus	12.53	25.38
Bra010683.1-P	Field mustard	nucleus	17.54	23.65
Bra011861.1-P	Field mustard	nucleus	17.54	23.49
Bra033616.1-P	Field mustard	nucleus	16.29	22.26
Bra037637.1-P	Field mustard	nucleus	9.52	20.99

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra010032	EnsemblPlants:Bra010032.1	EnsemblPlants:Bra010032.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
UniProt:M4D0N3	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF80	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000253EECA	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

AT5G49520 (E=5e-137) WRKY48, ATWRKY48 | WRKY48; transcription factor

Coordinates

chrA06:-:18742049..18744098

Molecular Weight (calculated)

44506.1 Da

IEP (calculated)

6.765

GRAVY (calculated)

-0.874

Length

399 amino acids

Sequence
(BLAST)

001: MEKKIEHQQK EQLNSTKNTE TKIDHQEIQI SQASSSSSHM ANLATSSDHH LHQLELAGNN INFSSIFDTP ISLPFPYSYF EDHSSNNPNS FLDLLRQDQH
101: QFASSSNPSS FSFDAFPLQN NNDTNLFFTD LPLPQAITTK AESSEVVNTA PTSPNSTSVS SSSNEAANDN TNKEVAVKDQ EGDQQEHKGT KPQLKAKKKN
201: QKKAREARFA FLTKSDIDNL DDGYRWRKYG QKAVKNSPYP RSYYRCTTVG CGVKKRVERS SDDPSIVMTT YEGQHSHPFP MTPRGHLGML TSPILDHGAT
301: TASSSSFSIP QPRYLLTQHH QPYNSMYNNS LSMINRSSPD GTFINPGPSS FPGFGYDHIP QASTTTTSAI RDHGLLQDIL PSQIREDTVN AQIVEEDKK

Best Arabidopsis Sequence Match ( AT5G49520.1 )
(BLAST)

001: MEKKKEEDHH HQQQQQQQKE IKNTETKIEQ EQEQEQKQEI SQASSSSNMA NLVTSSDHHP LELAGNLSSI FDTSSLPFPY SYFEDHSSNN PNSFLDLLRQ
101: DHQFASSSNS SSFSFDAFPL PNNNNNTSFF TDLPLPQAES SEVVNTTPTS PNSTSVSSSS NEAANDNNSG KEVTVKDQEE GDQQQEQKGT KPQLKAKKKN
201: QKKAREARFA FLTKSDIDNL DDGYRWRKYG QKAVKNSPYP RSYYRCTTVG CGVKKRVERS SDDPSIVMTT YEGQHTHPFP MTPRGHIGML TSPILDHGAT
301: TASSSSFSIP QPRYLLTQHH QPYNMYNNNS LSMINRRSSD GTFVNPGPSS SFPGFGYDMS QASTSTSSSI RDHGLLQDIL PSQIRSDTIN TQTNEENKK

Arabidopsis Description

WRKY48Probable WRKY transcription factor 48 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGZ4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.