Factsheet for Bra036138.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72613	Canola	nucleus	91.22	99.69
Bra010032.1-P	Field mustard	nucleus	83.29	73.68
Bra020628.1-P	Field mustard	nucleus	80.45	72.45
AT5G49520.1	Thale cress	nucleus	81.87	72.43
VIT_05s0077g00730.t01	Wine grape	nucleus	38.53	44.01
Bra040557.1-P	Field mustard	nucleus	17.56	43.06
Bra006178.1-P	Field mustard	nucleus	16.43	39.46
Bra008858.1-P	Field mustard	nucleus	16.43	39.46
KRH36956	Soybean	nucleus	35.69	38.07
GSMUA_AchrUn_...	Banana	nucleus	30.03	35.22
KRH11917	Soybean	nucleus	35.41	35.11
Bra004002.1-P	Field mustard	nucleus	28.05	34.26
GSMUA_Achr8P10740_001	Banana	nucleus	30.03	33.87
Bra038313.1-P	Field mustard	nucleus	28.61	33.78
Bra004370.1-P	Field mustard	nucleus	28.05	33.67
Bra020546.1-P	Field mustard	nucleus	15.86	33.33
Bra025490.1-P	Field mustard	nucleus	16.43	33.33
Bra032340.1-P	Field mustard	nucleus	25.5	32.97
Bra030178.1-P	Field mustard	nucleus	25.78	32.85
Bra004466.1-P	Field mustard	nucleus	29.18	32.29
Bra040926.1-P	Field mustard	nucleus	26.35	31.63
Bra037796.1-P	Field mustard	nucleus	15.01	31.55
Bra012614.1-P	Field mustard	nucleus	27.76	31.41
Bra027768.1-P	Field mustard	nucleus	16.43	31.02
Bra027675.1-P	Field mustard	nucleus	16.43	30.69
Bra009885.1-P	Field mustard	nucleus	15.3	30.68
Bra021393.1-P	Field mustard	nucleus	27.76	30.34
Bra000362.1-P	Field mustard	nucleus	17.85	30.0
Bra013289.1-P	Field mustard	nucleus	26.06	29.87
Bra004864.1-P	Field mustard	nucleus	18.13	29.77
Bra022033.1-P	Field mustard	nucleus	26.63	29.65
Bra007674.1-P	Field mustard	nucleus	24.36	28.86
Bra025021.1-P	Field mustard	nucleus	25.5	27.86
Bra036563.1-P	Field mustard	nucleus	12.46	27.85
Bra024328.1-P	Field mustard	nucleus	16.15	27.67
Bra017561.1-P	Field mustard	nucleus	24.93	27.41
Bra031900.1-P	Field mustard	nucleus	14.73	26.4
Bra010683.1-P	Field mustard	nucleus	20.96	25.0
Bra011861.1-P	Field mustard	nucleus	20.4	24.16
Bra033616.1-P	Field mustard	nucleus	18.98	22.95
Bra037637.1-P	Field mustard	nucleus	10.48	20.44

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra036138	EnsemblPlants:Bra036138.1	EnsemblPlants:Bra036138.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
UniProt:M4F4Y4	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF80	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI0002541F30	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

AT5G49520 (E=1e-122) WRKY48, ATWRKY48 | WRKY48; transcription factor

Coordinates

chrA09:+:2551208..2552978

Molecular Weight (calculated)

39424.4 Da

IEP (calculated)

6.707

GRAVY (calculated)

-0.764

Length

353 amino acids

Sequence
(BLAST)

001: MVNLDTSSDH HNHQLELANN INLSSIFDAP VSSPFPYSYL AEEPNHFLDL LSQDHHQFAS SSNSSSFSFD AFPLQNNNTN LFYTDLPLSQ PSTTKAMSSE
101: VVNTATTSPN STSVSSSSKE AVNDNTDKEV TLKDPEEGDQ QEQKDTKPQL KAKKKNQKKA REARFAFLTR SDIDNLDDGY RWRKYGQKAV KNSPYPRSYY
201: RCTTVGCGVK KRVERSSDDP YIVMTTYEGQ HTHPFPMTRG HIAMLTSPIL NHGATTASSS SFSIPQPRYL LTQHHQPYSS MYNNSLSMIN QSSSDGIFAN
301: PGSSSFPVFS YDVSLASTST TSVIRDHGLL QDILPSQIMS DTIDTRTNEK DRK

Best Arabidopsis Sequence Match ( AT5G49520.1 )
(BLAST)

001: MEKKKEEDHH HQQQQQQQKE IKNTETKIEQ EQEQEQKQEI SQASSSSNMA NLVTSSDHHP LELAGNLSSI FDTSSLPFPY SYFEDHSSNN PNSFLDLLRQ
101: DHQFASSSNS SSFSFDAFPL PNNNNNTSFF TDLPLPQAES SEVVNTTPTS PNSTSVSSSS NEAANDNNSG KEVTVKDQEE GDQQQEQKGT KPQLKAKKKN
201: QKKAREARFA FLTKSDIDNL DDGYRWRKYG QKAVKNSPYP RSYYRCTTVG CGVKKRVERS SDDPSIVMTT YEGQHTHPFP MTPRGHIGML TSPILDHGAT
301: TASSSSFSIP QPRYLLTQHH QPYNMYNNNS LSMINRRSSD GTFVNPGPSS SFPGFGYDMS QASTSTSSSI RDHGLLQDIL PSQIRSDTIN TQTNEENKK

Arabidopsis Description

WRKY48Probable WRKY transcription factor 48 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGZ4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.