Factsheet for Bra010683.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72079	Canola	nucleus	37.16	99.1
CDY12144	Canola	nucleus	97.3	97.63
Bra033616.1-P	Field mustard	nucleus	78.72	79.79
Bra011861.1-P	Field mustard	nucleus	77.7	77.18
AT4G39410.1	Thale cress	nucleus	78.38	76.32
GSMUA_Achr5P06260_001	Banana	nucleus	26.01	74.76
VIT_07s0031g01840.t01	Wine grape	nucleus	42.57	55.75
KRH43340	Soybean	nucleus	43.58	54.89
KRH53810	Soybean	nucleus	42.91	53.81
KRH64133	Soybean	nucleus	42.23	53.42
KRH59476	Soybean	nucleus	38.18	52.31
PGSC0003DMT400050745	Potato	nucleus	40.2	50.85
Solyc04g051540.2.1	Tomato	nucleus	39.86	50.43
GSMUA_Achr7P13310_001	Banana	nucleus	35.14	43.7
Bra000362.1-P	Field mustard	nucleus	30.74	43.33
Bra004864.1-P	Field mustard	nucleus	30.41	41.86
TraesCS3A01G116200.1	Wheat	plastid	35.81	40.46
TraesCS3D01G118100.1	Wheat	nucleus, plastid	35.47	40.08
Os01t0182700-01	Rice	nucleus	37.5	39.64
HORVU3Hr1G021120.1	Barley	nucleus, plastid	35.14	39.39
TraesCS3B01G135300.1	Wheat	nucleus, plastid	35.14	39.25
GSMUA_Achr10P...	Banana	nucleus	35.47	38.18
Bra040557.1-P	Field mustard	nucleus	17.91	36.81
Bra006178.1-P	Field mustard	nucleus	17.91	36.05
Zm00001d039584_P001	Maize	nucleus	34.46	34.81
Bra008858.1-P	Field mustard	nucleus	17.23	34.69
OQU86187	Sorghum	mitochondrion, nucleus	34.46	34.58
Bra037637.1-P	Field mustard	nucleus	20.95	34.25
Bra020546.1-P	Field mustard	nucleus	19.26	33.93
Bra009885.1-P	Field mustard	nucleus	18.92	31.82
Bra025490.1-P	Field mustard	nucleus	18.24	31.03
Bra036563.1-P	Field mustard	nucleus	16.22	30.38
Bra027675.1-P	Field mustard	nucleus	19.26	30.16
Bra027768.1-P	Field mustard	nucleus	18.92	29.95
Bra037796.1-P	Field mustard	nucleus	16.55	29.17
Bra024328.1-P	Field mustard	nucleus	18.24	26.21
Bra031900.1-P	Field mustard	nucleus	16.89	25.38
Bra040926.1-P	Field mustard	nucleus	24.66	24.83
Bra012614.1-P	Field mustard	nucleus	25.34	24.04
Bra030178.1-P	Field mustard	nucleus	22.3	23.83
Bra032340.1-P	Field mustard	nucleus	21.62	23.44
Bra004370.1-P	Field mustard	nucleus	22.64	22.79
Bra013289.1-P	Field mustard	nucleus	23.65	22.73
Bra004466.1-P	Field mustard	nucleus	24.32	22.57
Bra004002.1-P	Field mustard	nucleus	21.96	22.49
Bra025021.1-P	Field mustard	nucleus	24.32	22.29
Bra038313.1-P	Field mustard	nucleus	22.3	22.07
Bra022033.1-P	Field mustard	nucleus	23.31	21.77
Bra017561.1-P	Field mustard	nucleus	23.31	21.5
Bra036138.1-P	Field mustard	nucleus	25.0	20.96
Bra007674.1-P	Field mustard	nucleus	20.95	20.81
Bra021393.1-P	Field mustard	nucleus	21.62	19.81
Bra020628.1-P	Field mustard	nucleus	23.99	18.11
Bra010032.1-P	Field mustard	nucleus	23.65	17.54

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra010683	EnsemblPlants:Bra010683.1	EnsemblPlants:Bra010683.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
UniProt:M4D2I3	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF47	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI00025467A1	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

AT4G39410 (E=2e-088) WRKY13, ATWRKY13 | WRKY13; transcription factor

Coordinates

chrA08:+:15965109..15967442

Molecular Weight (calculated)

33901.2 Da

IEP (calculated)

8.109

GRAVY (calculated)

-0.950

Length

296 amino acids

Sequence
(BLAST)

001: MSTINQGVSL FDEPQNIINT NNTNTLGFFF SFPNHTLSSS SSPSSLVSPF LGHHSFNSFI HNNSPSFVTH PRDPINPMAN LPETLISVSS LASSKQRHDH
101: DGIVNLDQHR LTGEISSQRP SLNPWAWSSQ AGYEYNKKNN HTSEIDVDHN IDHDGCDGDG SNDDDDHQHH ETRRHKINTS PLGIMSTLKM KKPKTRKKVR
201: EPRFCFKTLS DVDVLDDGYR WRKYGQKVVK NTQHPRSYYR CTQEKCRVKK RVERLADDPR MVITTYEGRH LHSPSNHLDD DPLSSSHHSS LSNFFW

Best Arabidopsis Sequence Match ( AT4G39410.1 )
(BLAST)

001: MGAINQGISL FDESQTVINP INTNHLGFFF SFPSHSTLSS SSSSSSSSPS SLVSPFLGHN SLNSFLHNNP SSFISHPQDS INLMTNLPET LISSLSSSKQ
101: RDDHDGFLNL DHHRLTGSIS SQRPLSNPWA WSCQAGYGSS QKNNHGSEID VDDNDDEVGD GGGINDDDNG RHHHHDTPSR HDKHNTASLG VVSSLKMKKL
201: KTRRKVREPR FCFKTLSEVD VLDDGYRWRK YGQKVVKNTQ HPRSYYRCTQ DKCRVKKRVE RLADDPRMVI TTYEGRHLHS PSNHLDDDSL STSHLHPPLS
301: NFFW

Arabidopsis Description

WRKY13WRKY13 [Source:UniProtKB/TrEMBL;Acc:A0A178UV80]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.