Factsheet for TraesCS3B01G135300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 4
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G116200.1	Wheat	plastid	92.83	93.89
HORVU3Hr1G021120.1	Barley	nucleus, plastid	93.21	93.56
TraesCS3D01G118100.1	Wheat	nucleus, plastid	90.94	91.98
GSMUA_Achr5P06260_001	Banana	nucleus	30.94	79.61
CDY72079	Canola	nucleus	31.32	74.77
Zm00001d039584_P001	Maize	nucleus	73.21	66.21
OQU86187	Sorghum	mitochondrion, nucleus	73.58	66.1
Os01t0182700-01	Rice	nucleus	67.92	64.29
VIT_07s0031g01840.t01	Wine grape	nucleus	42.26	49.56
KRH43340	Soybean	nucleus	42.26	47.66
KRH64133	Soybean	nucleus	41.89	47.44
GSMUA_Achr7P13310_001	Banana	nucleus	42.26	47.06
KRH53810	Soybean	nucleus	41.51	46.61
KRH59476	Soybean	nucleus	37.74	46.3
PGSC0003DMT400050745	Potato	nucleus	39.25	44.44
Solyc04g051540.2.1	Tomato	nucleus	38.11	43.16
TraesCS2B01G410400.1	Wheat	nucleus	33.21	38.43
GSMUA_Achr10P...	Banana	nucleus	39.25	37.82
CDY53184	Canola	nucleus	40.38	36.52
Bra033616.1-P	Field mustard	nucleus	40.0	36.3
AT4G39410.1	Thale cress	nucleus	41.51	36.18
CDX72701	Canola	nucleus	38.11	35.82
Bra011861.1-P	Field mustard	nucleus	40.0	35.57
CDY41978	Canola	nucleus	40.0	35.57
Bra010683.1-P	Field mustard	nucleus	39.25	35.14
CDY12144	Canola	nucleus	38.87	34.92
TraesCS6B01G282500.1	Wheat	nucleus	29.43	33.05
TraesCS2B01G010500.1	Wheat	nucleus	21.51	27.8
TraesCS1B01G374900.1	Wheat	plastid	20.75	25.0
TraesCS1B01G374700.1	Wheat	nucleus, plastid	20.75	24.66
TraesCS1B01G363200.1	Wheat	nucleus	20.38	23.58
TraesCS3B01G277300.1	Wheat	plastid	17.74	23.5
TraesCS3B01G129900.1	Wheat	nucleus	19.25	22.97
TraesCS1B01G453200.1	Wheat	nucleus	24.53	22.65
TraesCS3B01G240200.1	Wheat	nucleus	20.38	22.59
TraesCS2B01G280300.1	Wheat	nucleus	24.15	22.46
TraesCS1B01G453300.1	Wheat	nucleus	25.28	21.47
TraesCS5B01G399900.1	Wheat	nucleus	24.91	21.22
TraesCS3B01G256000.1	Wheat	nucleus	23.77	18.21
TraesCS3B01G270500.1	Wheat	nucleus	24.91	17.93

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR31221	PANTHER:PTHR31221:SF47	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:TraesCS3B01G135300	EnsemblPlants:TraesCS3B01G135300.1
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3B:+:117720919..117726191

Molecular Weight (calculated)

27941.0 Da

IEP (calculated)

9.973

GRAVY (calculated)

-0.488

Length

265 amino acids

Sequence
(BLAST)

001: MMFPSPGGAA MALAHGQAAS TGATTAGGTA TAITFSFQPS DPPLNGGLSH HHGLLGYSPL VLDHPTTTTS SSSTIPAAPT LHHLHGHAHA GAIHPPRSSP
101: PHPWSCEEAD RERQMGEGAV VGMGVNSVAA GGSGGGGRSH GSAAAAAGMG VGAVRMKKAA GGGGVKARRK VREPRFCFKT MSDVDVLDDG YKWRKYGQKV
201: VIKNTQHPRS YYRCTQDKCR VKKRVERLAE DPRMVITTYE GRHVHSPSRD DDDAARASAE MSFIW

Best Arabidopsis Sequence Match ( AT4G39410.1 )
(BLAST)

001: MGAINQGISL FDESQTVINP INTNHLGFFF SFPSHSTLSS SSSSSSSSPS SLVSPFLGHN SLNSFLHNNP SSFISHPQDS INLMTNLPET LISSLSSSKQ
101: RDDHDGFLNL DHHRLTGSIS SQRPLSNPWA WSCQAGYGSS QKNNHGSEID VDDNDDEVGD GGGINDDDNG RHHHHDTPSR HDKHNTASLG VVSSLKMKKL
201: KTRRKVREPR FCFKTLSEVD VLDDGYRWRK YGQKVVKNTQ HPRSYYRCTQ DKCRVKKRVE RLADDPRMVI TTYEGRHLHS PSNHLDDDSL STSHLHPPLS
301: NFFW

Arabidopsis Description

WRKY13WRKY13 [Source:UniProtKB/TrEMBL;Acc:A0A178UV80]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.