Factsheet for TraesCS3B01G256000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G226300.1	Wheat	nucleus	96.82	97.1
TraesCS3A01G228600.1	Wheat	nucleus	96.24	96.52
Zm00001d044162_P001	Maize	nucleus	68.21	67.05
EES01107	Sorghum	nucleus	69.36	66.48
Os01t0626400-01	Rice	nucleus	69.36	63.32
Zm00001d011413_P001	Maize	nucleus	65.61	63.23
TraesCS1B01G453300.1	Wheat	nucleus	36.42	40.38
TraesCS1B01G453200.1	Wheat	nucleus	33.24	40.07
TraesCS3B01G270500.1	Wheat	nucleus	33.81	31.79
TraesCS5B01G399900.1	Wheat	nucleus	27.75	30.87
TraesCS2B01G010500.1	Wheat	nucleus	18.21	30.73
TraesCS2B01G280300.1	Wheat	nucleus	25.14	30.53
TraesCS2B01G410400.1	Wheat	nucleus	18.5	27.95
TraesCS1B01G363200.1	Wheat	nucleus	17.92	27.07
TraesCS6B01G282500.1	Wheat	nucleus	17.92	26.27
TraesCS3B01G277300.1	Wheat	plastid	15.03	26.0
TraesCS1B01G374700.1	Wheat	nucleus, plastid	16.47	25.56
TraesCS1B01G374900.1	Wheat	plastid	16.18	25.45
TraesCS3B01G129900.1	Wheat	nucleus	16.18	25.23
TraesCS3B01G135300.1	Wheat	nucleus, plastid	18.21	23.77
TraesCS3B01G240200.1	Wheat	nucleus	16.18	23.43

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR31221	PANTHER:PTHR31221:SF52	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:TraesCS3B01G256000	EnsemblPlants:TraesCS3B01G256000.1
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3B:+:413417660..413419677

Molecular Weight (calculated)

37752.8 Da

IEP (calculated)

7.162

GRAVY (calculated)

-0.924

Length

346 amino acids

Sequence
(BLAST)

001: MSSGGGGGGD QGRHGLYHQH GHGQLTRYDG AGGYELSNDD MESFFFNQPE GVGGGVRDDE IAPYSSITNY LQGFLLDPAG LTRHLDVPAK HELSVDVRSH
101: DQESQGTGSA AGESAALLTP NSSVSFSSGG GDGEGKSRRS NKGRAQEADD QEDGKDHEDG ESSKTANNKP KKKAEKRPRL PRVSFLTKSE VDHLEDGYRW
201: RKYGQKAVKN SPYPRSYYRC TTPKCGVKKQ VERSYQDPST VITTYEGQHT HHSPASLRGS AAHLFMPPGL HGLPPPHLIP PGVFHPELMS MMRMPYPSPN
301: MHLLSVPPPP HHHPASHPMA GTLQQHHFTD YALLQDLSPS TMPNNP

Best Arabidopsis Sequence Match ( AT2G47260.1 )
(BLAST)

001: MEFTDFSKTS FYYPSSQSVW DFGDLAAAER HSLGFMELLS SQQHQDFATV SPHSFLLQTS QPQTQTQPSA KLSSSIIQAP PSEQLVTSKV ESLCSDHLLI
101: NPPATPNSSS ISSASSEALN EEKPKTEDNE EEGGEDQQEK SHTKKQLKAK KNNQKRQREA RVAFMTKSEV DHLEDGYRWR KYGQKAVKNS PFPRSYYRCT
201: TASCNVKKRV ERSFRDPSTV VTTYEGQHTH ISPLTSRPIS TGGFFGSSGA ASSLGNGCFG FPIDGSTLIS PQFQQLVQYH HQQQQQELMS CFGGVNEYLN
301: SHANEYGDDN RVKKSRVLVK DNGLLQDVVP SHMLKEE

Arabidopsis Description

WRKY23Probable WRKY transcription factor 23 [Source:UniProtKB/Swiss-Prot;Acc:O22900]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.