Factsheet for Os01t0626400-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01107	Sorghum	nucleus	68.6	72.02
Zm00001d044162_P001	Maize	nucleus	65.17	70.17
TraesCS3D01G226300.1	Wheat	nucleus	63.85	70.14
TraesCS3A01G228600.1	Wheat	nucleus	63.59	69.86
TraesCS3B01G256000.1	Wheat	nucleus	63.32	69.36
Zm00001d011413_P001	Maize	nucleus	63.59	67.13
Os05t0583000-01	Rice	nucleus	40.9	45.99
Os03t0758000-01	Rice	nucleus, plastid	22.69	37.23
Os05t0565900-00	Rice	nucleus	37.47	33.89
Os07t0111400-00	Rice	nucleus	24.27	31.72
Os01t0186000-01	Rice	cytosol, nucleus	14.78	29.02
Os05t0537100-00	Rice	cytosol, plastid	16.89	28.96
Os11t0490900-01	Rice	nucleus	17.41	27.27
Os05t0183100-01	Rice	nucleus	14.25	25.47
Os04t0545000-01	Rice	cytosol	16.62	25.2
Os01t0734000-01	Rice	nucleus	16.36	24.41
Os01t0714800-01	Rice	plastid	15.57	24.08
Os01t0584900-01	Rice	nucleus	15.57	23.98
Os02t0652100-01	Rice	extracellular, mitochondrion, nucleus	9.76	22.7
Os01t0182700-01	Rice	nucleus	16.62	22.5
Os01t0665500-00	Rice	plastid	4.22	14.04

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EntrezGene:4326690	EMBL:AK108745	EMBL:AY341856	ProteinID:BAB19075.1
ProteinID:BAB19096.1	ProteinID:BAF05542.1	ProteinID:BAS73255.1	ProteinID:DAA05076.1	ProteinID:EAZ12756.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	EMBL:HQ858857	InterPro:IPR003657
InterPro:IPR036576	EnsemblPlantsGene:Os01g0626400	EnsemblPlants:Os01t0626400-01	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221
PANTHER:PTHR31221:SF52	UniProt:Q9FE35	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI00000A890B	InterPro:WRKY_dom
InterPro:WRKY_dom_sf	RefSeq:XP_015626307.1	SEG:seg	:	:	:

Description

WRKY GENE11WRKY transcription factor, Control of flowering time and plant height (Os01t0626400-01);WRKY transcription factor, Splicing variant (Os01t0626400-02)

Coordinates

chr1:+:25009514..25012233

Molecular Weight (calculated)

39858.2 Da

IEP (calculated)

7.063

GRAVY (calculated)

-0.731

Length

379 amino acids

Sequence
(BLAST)

001: MSSGGGGGGG GDRHGPYHQH GHLGRGEGAD YVYSSSDMES FFFSQPGGVG IGGGGGGVVG AGGADEIMPY SSITDYLQGL LDPSGLARHL DVACPSSQDT
101: VVKQELSVDV TSHDSQGTGG VAGEGVAQAT PNSSASFSSS DGEAEGGKSS RRCKKGQAKA EEEDDKDEED GENSKKPNKP KKKAEKRQRQ PRVAFLTKSE
201: VDHLEDGYRW RKYGQKAVKN SPYPRSYYRC TTPKCGVKKR VERSYQDPST VITTYEGQHT HHSPASLRGG GGGVGIVGGH HHHHLFMPGV HGLPPSHLMP
301: AGFHPELMGL MHHHPAMAAA AANPSMYFPG VAASAPPPPA VAGGGAMPPN DHPPLQQHHF TDYALLQDLF PSTMPSSNP

Best Arabidopsis Sequence Match ( AT4G18170.1 )
(BLAST)

001: MSNETRDLYN YQYPSSFSLH EMMNLPTSNP SSYGNLPSQN GFNPSTYSFT DCLQSSPAAY ESLLQKTFGL SPSSSEVFNS SIDQEPNRDV TNDVINGGAC
101: NETETRVSPS NSSSSEADHP GEDSGKSRRK RELVGEEDQI SKKVGKTKKT EVKKQREPRV SFMTKSEVDH LEDGYRWRKY GQKAVKNSPY PRSYYRCTTQ
201: KCNVKKRVER SFQDPTVVIT TYEGQHNHPI PTNLRGSSAA AAMFSADLMT PRSFAHDMFR TAAYTNGGSV AAALDYGYGQ SGYGSVNSNP SSHQVYHQGG
301: EYELLREIFP SIFFKQEP

Arabidopsis Description

WRKY28WRKY28 [Source:UniProtKB/TrEMBL;Acc:A0A178V3M3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.