Factsheet for Zm00001d011413_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01107	Sorghum	nucleus	84.68	84.21
Zm00001d044162_P001	Maize	nucleus	80.5	82.1
TraesCS3D01G226300.1	Wheat	nucleus	64.35	66.96
TraesCS3B01G256000.1	Wheat	nucleus	63.23	65.61
TraesCS3A01G228600.1	Wheat	nucleus	62.95	65.51
Os01t0626400-01	Rice	nucleus	67.13	63.59
Zm00001d043950_P001	Maize	nucleus	34.82	32.81
Zm00001d011527_P001	Maize	nucleus	35.1	30.43
Zm00001d051328_P002	Maize	nucleus	19.22	29.36
Zm00001d037607_P001	Maize	nucleus	15.88	29.23
Zm00001d007329_P001	Maize	nucleus	17.55	28.64
Zm00001d011133_P001	Maize	plastid	15.6	28.57
Zm00001d017444_P001	Maize	extracellular, vacuole	18.38	28.57
Zm00001d038761_P002	Maize	nucleus	17.27	28.44
Zm00001d049173_P001	Maize	nucleus	18.11	28.38
Zm00001d012789_P001	Maize	nucleus	17.83	28.19
Zm00001d039032_P001	Maize	nucleus	31.75	27.94
Zm00001d034073_P001	Maize	nucleus	25.63	27.79
Zm00001d043663_P001	Maize	plastid	15.88	27.01
Zm00001d009939_P001	Maize	nucleus	15.32	26.83
Zm00001d038843_P001	Maize	plastid	16.43	26.7
Zm00001d018656_P001	Maize	nucleus	24.23	26.2
Zm00001d010805_P001	Maize	nucleus	16.71	26.2
Zm00001d008793_P001	Maize	nucleus	15.88	24.89
Zm00001d039584_P001	Maize	nucleus	18.11	22.18
Zm00001d039531_P001	Maize	nucleus	16.71	21.98
Zm00001d002794_P001	Maize	nucleus	16.71	21.13

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	ProteinID:AQK96812.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	UniProt:K7V3N0	EMBL:KJ726812
PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF52	SMART:SM00774	SUPFAM:SSF118290
UniParc:UPI000220B42B	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	EnsemblPlantsGene:Zm00001d011413	EnsemblPlants:Zm00001d011413_P001	EnsemblPlants:Zm00001d011413_T001
SEG:seg	:	:	:	:	:

Description

WRKY-transcription factor 28Putative WRKY DNA-binding domain superfamily protein

Coordinates

chr8:+:149844919..149847262

Molecular Weight (calculated)

39230.5 Da

IEP (calculated)

6.798

GRAVY (calculated)

-0.840

Length

359 amino acids

Sequence
(BLAST)

001: MSSGVRSGGG GDHHGVHHQH GHGHLAGADD GAEYAFYSND MESFFFNQPA SADVNNGGSR TGADELTMPP YSSVTDYLQG FMDMDPSGLA RHLDAPCLLA
101: EDAPLKHELS VDVSYDSQGT SGAPGDGAAA MHTPNSSVSL SSSDREGEGQ LRRCRKGRPK AEDDAEGDEK DQEDGENSTK ANRSKKKAEK RQPRVAFLTK
201: SEVDHLEDGY RWRKYGQKAV KNSPYPRSYY RCTAPKCGVK KRVERSYQDP STVVTTYEGQ HTHHSPASFR AGGAHLFMPN AHALPPQHLM LPSSFRPADL
301: MGMVHPVSMG ANLSMFLPTM PPHMPSPASR AHPLQQQQHQ FTDYALLQDL FPSTMPNNP

Best Arabidopsis Sequence Match ( AT4G18170.1 )
(BLAST)

001: MSNETRDLYN YQYPSSFSLH EMMNLPTSNP SSYGNLPSQN GFNPSTYSFT DCLQSSPAAY ESLLQKTFGL SPSSSEVFNS SIDQEPNRDV TNDVINGGAC
101: NETETRVSPS NSSSSEADHP GEDSGKSRRK RELVGEEDQI SKKVGKTKKT EVKKQREPRV SFMTKSEVDH LEDGYRWRKY GQKAVKNSPY PRSYYRCTTQ
201: KCNVKKRVER SFQDPTVVIT TYEGQHNHPI PTNLRGSSAA AAMFSADLMT PRSFAHDMFR TAAYTNGGSV AAALDYGYGQ SGYGSVNSNP SSHQVYHQGG
301: EYELLREIFP SIFFKQEP

Arabidopsis Description

WRKY28WRKY28 [Source:UniProtKB/TrEMBL;Acc:A0A178V3M3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.